RNA–Protein interactions for RNA: ENST00000480615.1

SNRNP200-204, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 5

Gene SNRNP200, Length 1,646 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-204ENST00000480615 NEBP20929 6669 aa5.05□□□□□ -1.6
SNRNP200-204ENST00000480615 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
SNRNP200-204ENST00000480615 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
SNRNP200-204ENST00000480615 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SNRNP200-204ENST00000480615 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
SNRNP200-204ENST00000480615 MT1EP04732 61 aa4.97□□□□□ -1.61
SNRNP200-204ENST00000480615 SPRR2DP22532 72 aa4.91□□□□□ -1.62
SNRNP200-204ENST00000480615 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
SNRNP200-204ENST00000480615 KRTAP23-1A1A580 65 aa4.86□□□□□ -1.63
SNRNP200-204ENST00000480615 KRTAP20-1Q3LI63 56 aa4.86□□□□□ -1.63
SNRNP200-204ENST00000480615 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
SNRNP200-204ENST00000480615 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
SNRNP200-204ENST00000480615 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SNRNP200-204ENST00000480615 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
SNRNP200-204ENST00000480615 KRTAP9-9Q9BYP9 154 aa4.82□□□□□ -1.64
SNRNP200-204ENST00000480615 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
SNRNP200-204ENST00000480615 MT1LQ93083 61 aa4.8□□□□□ -1.64
SNRNP200-204ENST00000480615 KRTAP2-3P0C7H8 128 aa4.79□□□□□ -1.64
SNRNP200-204ENST00000480615 KRTAP2-4Q9BYR9 128 aa4.79□□□□□ -1.64
SNRNP200-204ENST00000480615 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
SNRNP200-204ENST00000480615 MT1GP13640 62 aa4.76□□□□□ -1.65
SNRNP200-204ENST00000480615 MT1MQ8N339 61 aa4.72□□□□□ -1.65
SNRNP200-204ENST00000480615 DSTQ03001 7570 aaKnown RBP4.69□□□□□ -1.66
SNRNP200-204ENST00000480615 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
SNRNP200-204ENST00000480615 KRTAP4-3Q9BYR4 195 aa4.66□□□□□ -1.66
SNRNP200-204ENST00000480615 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
SNRNP200-204ENST00000480615 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
SNRNP200-204ENST00000480615 KRTAP4-7Q9BYR0 210 aa4.65□□□□□ -1.66
SNRNP200-204ENST00000480615 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
SNRNP200-204ENST00000480615 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
SNRNP200-204ENST00000480615 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
SNRNP200-204ENST00000480615 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.69
SNRNP200-204ENST00000480615 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
SNRNP200-204ENST00000480615 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
SNRNP200-204ENST00000480615 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
SNRNP200-204ENST00000480615 MT4P47944 62 aa4.31□□□□□ -1.72
SNRNP200-204ENST00000480615 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
SNRNP200-204ENST00000480615 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
SNRNP200-204ENST00000480615 KRTAP5-4Q6L8H1 288 aa4.27□□□□□ -1.73
SNRNP200-204ENST00000480615 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SNRNP200-204ENST00000480615 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
SNRNP200-204ENST00000480615 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
SNRNP200-204ENST00000480615 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
SNRNP200-204ENST00000480615 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
SNRNP200-204ENST00000480615 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
SNRNP200-204ENST00000480615 MT1AP04731 61 aa4.07□□□□□ -1.76
SNRNP200-204ENST00000480615 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
SNRNP200-204ENST00000480615 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
SNRNP200-204ENST00000480615 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
SNRNP200-204ENST00000480615 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
SNRNP200-204ENST00000480615 GPR98Q8WXG9 6306 aa3.85□□□□□ -1.79
SNRNP200-204ENST00000480615 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
SNRNP200-204ENST00000480615 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
SNRNP200-204ENST00000480615 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
SNRNP200-204ENST00000480615 INE1O15225 51 aa3.75□□□□□ -1.81
SNRNP200-204ENST00000480615 MT3P25713 68 aa3.72□□□□□ -1.81
SNRNP200-204ENST00000480615 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
SNRNP200-204ENST00000480615 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
SNRNP200-204ENST00000480615 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SNRNP200-204ENST00000480615 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
SNRNP200-204ENST00000480615 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
SNRNP200-204ENST00000480615 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
SNRNP200-204ENST00000480615 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
SNRNP200-204ENST00000480615 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
SNRNP200-204ENST00000480615 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
SNRNP200-204ENST00000480615 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
SNRNP200-204ENST00000480615 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
SNRNP200-204ENST00000480615 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
SNRNP200-204ENST00000480615 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
SNRNP200-204ENST00000480615 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
SNRNP200-204ENST00000480615 KRTAP5-11Q6L8G4 156 aa2.87□□□□□ -1.95
SNRNP200-204ENST00000480615 PRM1P04553 51 aa2.73□□□□□ -1.97
SNRNP200-204ENST00000480615 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
SNRNP200-204ENST00000480615 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
SNRNP200-204ENST00000480615 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
SNRNP200-204ENST00000480615 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SNRNP200-204ENST00000480615 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
SNRNP200-204ENST00000480615 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 76 ms