RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 KRTAP19-7Q3SYF9 63 aa4.68□□□□□ -1.66
SIK3-209ENST00000480222 SPRR2FQ96RM1 72 aa4.64□□□□□ -1.67
SIK3-209ENST00000480222 MT1EP04732 61 aa4.62□□□□□ -1.67
SIK3-209ENST00000480222 SPRR2EP22531 72 aa4.62□□□□□ -1.67
SIK3-209ENST00000480222 SPRR2BP35325 72 aa4.62□□□□□ -1.67
SIK3-209ENST00000480222 SPRR2AP35326 72 aa4.62□□□□□ -1.67
SIK3-209ENST00000480222 SVIPQ8NHG7 77 aa4.61□□□□□ -1.67
SIK3-209ENST00000480222 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
SIK3-209ENST00000480222 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
SIK3-209ENST00000480222 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
SIK3-209ENST00000480222 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
SIK3-209ENST00000480222 KRTAP15-1Q3LI76 137 aa4.54□□□□□ -1.68
SIK3-209ENST00000480222 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.68
SIK3-209ENST00000480222 MT1LQ93083 61 aa4.5□□□□□ -1.69
SIK3-209ENST00000480222 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
SIK3-209ENST00000480222 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
SIK3-209ENST00000480222 SPRR2DP22532 72 aa4.47□□□□□ -1.69
SIK3-209ENST00000480222 MT1GP13640 62 aa4.43□□□□□ -1.7
SIK3-209ENST00000480222 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
SIK3-209ENST00000480222 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
SIK3-209ENST00000480222 LCE3BQ5TA77 95 aa4.37□□□□□ -1.71
SIK3-209ENST00000480222 MT1MQ8N339 61 aa4.36□□□□□ -1.71
SIK3-209ENST00000480222 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
SIK3-209ENST00000480222 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
SIK3-209ENST00000480222 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
SIK3-209ENST00000480222 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
SIK3-209ENST00000480222 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
SIK3-209ENST00000480222 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
SIK3-209ENST00000480222 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
SIK3-209ENST00000480222 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
SIK3-209ENST00000480222 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
SIK3-209ENST00000480222 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
SIK3-209ENST00000480222 LUZP6Q538Z0 58 aa4□□□□□ -1.77
SIK3-209ENST00000480222 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
SIK3-209ENST00000480222 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
SIK3-209ENST00000480222 MT4P47944 62 aa3.93□□□□□ -1.78
SIK3-209ENST00000480222 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SIK3-209ENST00000480222 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
SIK3-209ENST00000480222 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
SIK3-209ENST00000480222 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
SIK3-209ENST00000480222 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
SIK3-209ENST00000480222 MT1AP04731 61 aa3.85□□□□□ -1.79
SIK3-209ENST00000480222 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
SIK3-209ENST00000480222 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
SIK3-209ENST00000480222 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
SIK3-209ENST00000480222 H3BS24 57 aa3.73□□□□□ -1.81
SIK3-209ENST00000480222 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
SIK3-209ENST00000480222 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
SIK3-209ENST00000480222 SYNE1Q8NF91 8797 aaKnown RBP3.64□□□□□ -1.83
SIK3-209ENST00000480222 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
SIK3-209ENST00000480222 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
SIK3-209ENST00000480222 MT3P25713 68 aa3.5□□□□□ -1.85
SIK3-209ENST00000480222 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
SIK3-209ENST00000480222 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
SIK3-209ENST00000480222 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
SIK3-209ENST00000480222 AHNAKQ09666 5890 aaKnown RBP3.43□□□□□ -1.86
SIK3-209ENST00000480222 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
SIK3-209ENST00000480222 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
SIK3-209ENST00000480222 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
SIK3-209ENST00000480222 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SIK3-209ENST00000480222 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SIK3-209ENST00000480222 INE1O15225 51 aa3.14□□□□□ -1.91
SIK3-209ENST00000480222 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
SIK3-209ENST00000480222 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SIK3-209ENST00000480222 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
SIK3-209ENST00000480222 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
SIK3-209ENST00000480222 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
SIK3-209ENST00000480222 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SIK3-209ENST00000480222 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
SIK3-209ENST00000480222 PRM1P04553 51 aa2.64□□□□□ -1.99
SIK3-209ENST00000480222 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SIK3-209ENST00000480222 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
SIK3-209ENST00000480222 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SIK3-209ENST00000480222 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
SIK3-209ENST00000480222 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SIK3-209ENST00000480222 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
SIK3-209ENST00000480222 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SIK3-209ENST00000480222 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 200.4 ms