RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 TNP1P09430 55 aa3.47□□□□□ -1.85
NUDCD3-208ENST00000480209 ROMO1P60602 79 aa3.46□□□□□ -1.86
NUDCD3-208ENST00000480209 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
NUDCD3-208ENST00000480209 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
NUDCD3-208ENST00000480209 LCE3AQ5TA76 89 aa3.43□□□□□ -1.86
NUDCD3-208ENST00000480209 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
NUDCD3-208ENST00000480209 KRTAP8-1Q8IUC2 63 aa3.42□□□□□ -1.86
NUDCD3-208ENST00000480209 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
NUDCD3-208ENST00000480209 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
NUDCD3-208ENST00000480209 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
NUDCD3-208ENST00000480209 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
NUDCD3-208ENST00000480209 PMAIP1Q13794 54 aa3.37□□□□□ -1.87
NUDCD3-208ENST00000480209 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
NUDCD3-208ENST00000480209 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
NUDCD3-208ENST00000480209 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
NUDCD3-208ENST00000480209 NEBP20929 6669 aa3.31□□□□□ -1.88
NUDCD3-208ENST00000480209 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
NUDCD3-208ENST00000480209 MT1EP04732 61 aa3.31□□□□□ -1.88
NUDCD3-208ENST00000480209 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
NUDCD3-208ENST00000480209 SPRR2EP22531 72 aa3.24□□□□□ -1.89
NUDCD3-208ENST00000480209 SPRR2BP35325 72 aa3.24□□□□□ -1.89
NUDCD3-208ENST00000480209 SPRR2AP35326 72 aa3.24□□□□□ -1.89
NUDCD3-208ENST00000480209 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
NUDCD3-208ENST00000480209 MT3P25713 68 aa3.22□□□□□ -1.89
NUDCD3-208ENST00000480209 MT1LQ93083 61 aa3.21□□□□□ -1.9
NUDCD3-208ENST00000480209 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
NUDCD3-208ENST00000480209 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
NUDCD3-208ENST00000480209 MT1MQ8N339 61 aa3.13□□□□□ -1.91
NUDCD3-208ENST00000480209 MT1GP13640 62 aa3.12□□□□□ -1.91
NUDCD3-208ENST00000480209 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
NUDCD3-208ENST00000480209 SPRR2DP22532 72 aa3.11□□□□□ -1.91
NUDCD3-208ENST00000480209 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
NUDCD3-208ENST00000480209 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
NUDCD3-208ENST00000480209 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
NUDCD3-208ENST00000480209 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NUDCD3-208ENST00000480209 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
NUDCD3-208ENST00000480209 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
NUDCD3-208ENST00000480209 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
NUDCD3-208ENST00000480209 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
NUDCD3-208ENST00000480209 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
NUDCD3-208ENST00000480209 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
NUDCD3-208ENST00000480209 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
NUDCD3-208ENST00000480209 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
NUDCD3-208ENST00000480209 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
NUDCD3-208ENST00000480209 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
NUDCD3-208ENST00000480209 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
NUDCD3-208ENST00000480209 MT1AP04731 61 aa2.73□□□□□ -1.97
NUDCD3-208ENST00000480209 MT4P47944 62 aa2.73□□□□□ -1.97
NUDCD3-208ENST00000480209 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
NUDCD3-208ENST00000480209 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
NUDCD3-208ENST00000480209 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
NUDCD3-208ENST00000480209 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
NUDCD3-208ENST00000480209 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
NUDCD3-208ENST00000480209 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
NUDCD3-208ENST00000480209 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
NUDCD3-208ENST00000480209 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
NUDCD3-208ENST00000480209 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
NUDCD3-208ENST00000480209 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
NUDCD3-208ENST00000480209 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
NUDCD3-208ENST00000480209 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
NUDCD3-208ENST00000480209 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.03
NUDCD3-208ENST00000480209 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
NUDCD3-208ENST00000480209 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
NUDCD3-208ENST00000480209 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
NUDCD3-208ENST00000480209 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
NUDCD3-208ENST00000480209 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
NUDCD3-208ENST00000480209 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
NUDCD3-208ENST00000480209 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
NUDCD3-208ENST00000480209 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
NUDCD3-208ENST00000480209 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
NUDCD3-208ENST00000480209 INE1O15225 51 aa1.96□□□□□ -2.1
NUDCD3-208ENST00000480209 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
NUDCD3-208ENST00000480209 PRM1P04553 51 aa1.82□□□□□ -2.12
NUDCD3-208ENST00000480209 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NUDCD3-208ENST00000480209 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
NUDCD3-208ENST00000480209 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
NUDCD3-208ENST00000480209 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
NUDCD3-208ENST00000480209 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms