RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
TRAPPC12-219ENST00000479955 MT1EP04732 61 aa4.32□□□□□ -1.72
TRAPPC12-219ENST00000479955 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
TRAPPC12-219ENST00000479955 SPRR2EP22531 72 aa4.3□□□□□ -1.72
TRAPPC12-219ENST00000479955 SPRR2BP35325 72 aa4.3□□□□□ -1.72
TRAPPC12-219ENST00000479955 SPRR2AP35326 72 aa4.3□□□□□ -1.72
TRAPPC12-219ENST00000479955 LCE1AQ5T7P2 110 aa4.28□□□□□ -1.72
TRAPPC12-219ENST00000479955 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
TRAPPC12-219ENST00000479955 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
TRAPPC12-219ENST00000479955 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
TRAPPC12-219ENST00000479955 NEBP20929 6669 aa4.22□□□□□ -1.73
TRAPPC12-219ENST00000479955 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
TRAPPC12-219ENST00000479955 MT1GP13640 62 aa4.2□□□□□ -1.74
TRAPPC12-219ENST00000479955 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
TRAPPC12-219ENST00000479955 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
TRAPPC12-219ENST00000479955 MT1LQ93083 61 aa4.18□□□□□ -1.74
TRAPPC12-219ENST00000479955 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
TRAPPC12-219ENST00000479955 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
TRAPPC12-219ENST00000479955 SPRR2DP22532 72 aa4.16□□□□□ -1.74
TRAPPC12-219ENST00000479955 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
TRAPPC12-219ENST00000479955 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
TRAPPC12-219ENST00000479955 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
TRAPPC12-219ENST00000479955 MT1MQ8N339 61 aa4.09□□□□□ -1.75
TRAPPC12-219ENST00000479955 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
TRAPPC12-219ENST00000479955 KRTAP2-3P0C7H8 128 aa4.07□□□□□ -1.76
TRAPPC12-219ENST00000479955 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
TRAPPC12-219ENST00000479955 KRTAP2-4Q9BYR9 128 aa4.07□□□□□ -1.76
TRAPPC12-219ENST00000479955 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
TRAPPC12-219ENST00000479955 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
TRAPPC12-219ENST00000479955 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
TRAPPC12-219ENST00000479955 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
TRAPPC12-219ENST00000479955 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
TRAPPC12-219ENST00000479955 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
TRAPPC12-219ENST00000479955 H3BS24 57 aa3.84□□□□□ -1.79
TRAPPC12-219ENST00000479955 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
TRAPPC12-219ENST00000479955 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
TRAPPC12-219ENST00000479955 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
TRAPPC12-219ENST00000479955 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC12-219ENST00000479955 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
TRAPPC12-219ENST00000479955 MT1AP04731 61 aa3.59□□□□□ -1.83
TRAPPC12-219ENST00000479955 MT4P47944 62 aa3.59□□□□□ -1.83
TRAPPC12-219ENST00000479955 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
TRAPPC12-219ENST00000479955 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.84
TRAPPC12-219ENST00000479955 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
TRAPPC12-219ENST00000479955 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
TRAPPC12-219ENST00000479955 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
TRAPPC12-219ENST00000479955 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
TRAPPC12-219ENST00000479955 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
TRAPPC12-219ENST00000479955 MT3P25713 68 aa3.3□□□□□ -1.88
TRAPPC12-219ENST00000479955 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
TRAPPC12-219ENST00000479955 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
TRAPPC12-219ENST00000479955 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
TRAPPC12-219ENST00000479955 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
TRAPPC12-219ENST00000479955 NDUFAF8A1L188 74 aa3.14□□□□□ -1.91
TRAPPC12-219ENST00000479955 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
TRAPPC12-219ENST00000479955 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
TRAPPC12-219ENST00000479955 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
TRAPPC12-219ENST00000479955 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
TRAPPC12-219ENST00000479955 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
TRAPPC12-219ENST00000479955 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
TRAPPC12-219ENST00000479955 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
TRAPPC12-219ENST00000479955 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
TRAPPC12-219ENST00000479955 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC12-219ENST00000479955 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
TRAPPC12-219ENST00000479955 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
TRAPPC12-219ENST00000479955 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
TRAPPC12-219ENST00000479955 MUC5ACP98088 5654 aa2.7□□□□□ -1.98
TRAPPC12-219ENST00000479955 INE1O15225 51 aa2.67□□□□□ -1.98
TRAPPC12-219ENST00000479955 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
TRAPPC12-219ENST00000479955 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
TRAPPC12-219ENST00000479955 PRM1P04553 51 aa2.34□□□□□ -2.03
TRAPPC12-219ENST00000479955 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
TRAPPC12-219ENST00000479955 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
TRAPPC12-219ENST00000479955 LCE1FQ5T754 118 aa2.3□□□□□ -2.04
TRAPPC12-219ENST00000479955 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
TRAPPC12-219ENST00000479955 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
TRAPPC12-219ENST00000479955 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
TRAPPC12-219ENST00000479955 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms