RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
SSR1-207ENST00000479485 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
SSR1-207ENST00000479485 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
SSR1-207ENST00000479485 MT1HL1P0DM35 61 aa1.66□□□□□ -2.14
SSR1-207ENST00000479485 SPRR2GQ9BYE4 73 aa1.65□□□□□ -2.15
SSR1-207ENST00000479485 DNHD1Q96M86 4753 aa1.64□□□□□ -2.15
SSR1-207ENST00000479485 HERC1Q15751 4861 aa1.63□□□□□ -2.15
SSR1-207ENST00000479485 M0R2T5 61 aa1.61□□□□□ -2.15
SSR1-207ENST00000479485 HYDINQ4G0P3 5121 aa1.61□□□□□ -2.15
SSR1-207ENST00000479485 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
SSR1-207ENST00000479485 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
SSR1-207ENST00000479485 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.15
SSR1-207ENST00000479485 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
SSR1-207ENST00000479485 MUC17Q685J3 4493 aa1.56□□□□□ -2.16
SSR1-207ENST00000479485 LPAP08519 4548 aa1.54□□□□□ -2.16
SSR1-207ENST00000479485 LRP2P98164 4655 aa1.53□□□□□ -2.16
SSR1-207ENST00000479485 KRTAP19-8Q3LI54 63 aa1.53□□□□□ -2.16
SSR1-207ENST00000479485 RYR2Q92736 4967 aa1.53□□□□□ -2.16
SSR1-207ENST00000479485 KMT2CQ8NEZ4 4911 aaKnown RBP1.52□□□□□ -2.17
SSR1-207ENST00000479485 KRTAP21-3Q3LHN1 58 aa1.49□□□□□ -2.17
SSR1-207ENST00000479485 RYR1P21817 5038 aa1.48□□□□□ -2.17
SSR1-207ENST00000479485 MT1XP80297 61 aa1.48□□□□□ -2.17
SSR1-207ENST00000479485 KRTAP19-5Q3LI72 72 aa1.45□□□□□ -2.18
SSR1-207ENST00000479485 MT1BP07438 61 aa1.42□□□□□ -2.18
SSR1-207ENST00000479485 MT2AP02795 61 aa1.41□□□□□ -2.18
SSR1-207ENST00000479485 MT1FP04733 61 aa1.4□□□□□ -2.19
SSR1-207ENST00000479485 RYR3Q15413 4870 aa1.4□□□□□ -2.19
SSR1-207ENST00000479485 HMCN2Q8NDA2 5059 aa1.39□□□□□ -2.19
SSR1-207ENST00000479485 MT1EP04732 61 aa1.38□□□□□ -2.19
SSR1-207ENST00000479485 MT1HP80294 61 aa1.37□□□□□ -2.19
SSR1-207ENST00000479485 HERC2O95714 4834 aa1.37□□□□□ -2.19
SSR1-207ENST00000479485 BIRC6Q9NR09 4857 aa1.36□□□□□ -2.19
SSR1-207ENST00000479485 MT1AP04731 61 aa1.35□□□□□ -2.19
SSR1-207ENST00000479485 MT1LQ93083 61 aa1.35□□□□□ -2.19
SSR1-207ENST00000479485 ABCA13Q86UQ4 5058 aa1.34□□□□□ -2.2
SSR1-207ENST00000479485 MUC2Q02817 5179 aa1.32□□□□□ -2.2
SSR1-207ENST00000479485 KIAA1109Q2LD37 5005 aa1.32□□□□□ -2.2
SSR1-207ENST00000479485 PCLOQ9Y6V0 5065 aa1.31□□□□□ -2.2
SSR1-207ENST00000479485 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
SSR1-207ENST00000479485 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
SSR1-207ENST00000479485 PRM1P04553 51 aa1.29□□□□□ -2.2
SSR1-207ENST00000479485 EPPK1P58107 5090 aaKnown RBP1.24□□□□□ -2.21
SSR1-207ENST00000479485 MT1GP13640 62 aa1.22□□□□□ -2.21
SSR1-207ENST00000479485 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
SSR1-207ENST00000479485 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
SSR1-207ENST00000479485 SPRR2AP35326 72 aa1.19□□□□□ -2.22
SSR1-207ENST00000479485 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
SSR1-207ENST00000479485 MT1MQ8N339 61 aa1.18□□□□□ -2.22
SSR1-207ENST00000479485 RNF213Q63HN8 5207 aa1.16□□□□□ -2.22
SSR1-207ENST00000479485 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
SSR1-207ENST00000479485 SPRR2BP35325 72 aa1.15□□□□□ -2.23
SSR1-207ENST00000479485 SYNE1Q8NF91 8797 aaKnown RBP1.14□□□□□ -2.23
SSR1-207ENST00000479485 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
SSR1-207ENST00000479485 SPRR2EP22531 72 aa1.11□□□□□ -2.23
SSR1-207ENST00000479485 SPRR2DP22532 72 aa1.1□□□□□ -2.23
SSR1-207ENST00000479485 KMT2DO14686 5537 aa1.09□□□□□ -2.24
SSR1-207ENST00000479485 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
SSR1-207ENST00000479485 USH2AO75445 5202 aa1.06□□□□□ -2.24
SSR1-207ENST00000479485 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
SSR1-207ENST00000479485 SSPOA2VEC9 5147 aa1.05□□□□□ -2.24
SSR1-207ENST00000479485 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
SSR1-207ENST00000479485 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
SSR1-207ENST00000479485 MUC12Q9UKN1 5478 aa0.87□□□□□ -2.27
SSR1-207ENST00000479485 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
SSR1-207ENST00000479485 MDN1Q9NU22 5596 aa0.86□□□□□ -2.27
SSR1-207ENST00000479485 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
SSR1-207ENST00000479485 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
SSR1-207ENST00000479485 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
SSR1-207ENST00000479485 FSIP2Q5CZC0 6907 aa0.76□□□□□ -2.29
SSR1-207ENST00000479485 SYNE2Q8WXH0 6885 aaKnown RBP0.75□□□□□ -2.29
SSR1-207ENST00000479485 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
SSR1-207ENST00000479485 GPR98Q8WXG9 6306 aa0.73□□□□□ -2.29
SSR1-207ENST00000479485 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
SSR1-207ENST00000479485 MACF1Q9UPN3 7388 aaKnown RBP0.66□□□□□ -2.3
SSR1-207ENST00000479485 KRTAP20-1Q3LI63 56 aa0.66□□□□□ -2.3
SSR1-207ENST00000479485 MT4P47944 62 aa0.64□□□□□ -2.31
SSR1-207ENST00000479485 NEBP20929 6669 aa0.61□□□□□ -2.31
SSR1-207ENST00000479485 PHGR1C9JFL3 82 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 85.4 ms