RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 KTN1-AS1Q86SY8 53 aa3.95□□□□□ -1.78
CCM2-210ENST00000478169 R4GN34 69 aa3.91□□□□□ -1.78
CCM2-210ENST00000478169 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.79
CCM2-210ENST00000478169 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
CCM2-210ENST00000478169 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
CCM2-210ENST00000478169 M0QZ58 72 aa3.86□□□□□ -1.79
CCM2-210ENST00000478169 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
CCM2-210ENST00000478169 K7ERS5 55 aa3.85□□□□□ -1.79
CCM2-210ENST00000478169 P0C880 135 aa3.85□□□□□ -1.79
CCM2-210ENST00000478169 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
CCM2-210ENST00000478169 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
CCM2-210ENST00000478169 A0A1B0GU33 70 aa3.78□□□□□ -1.8
CCM2-210ENST00000478169 A8MU10 97 aa3.76□□□□□ -1.81
CCM2-210ENST00000478169 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
CCM2-210ENST00000478169 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
CCM2-210ENST00000478169 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
CCM2-210ENST00000478169 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
CCM2-210ENST00000478169 MT1EP04732 61 aa3.61□□□□□ -1.83
CCM2-210ENST00000478169 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
CCM2-210ENST00000478169 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
CCM2-210ENST00000478169 ROMO1P60602 79 aa3.58□□□□□ -1.84
CCM2-210ENST00000478169 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
CCM2-210ENST00000478169 KRTAP25-1Q3LHN0 102 aa3.56□□□□□ -1.84
CCM2-210ENST00000478169 CAMK2N1Q7Z7J9 78 aa3.55□□□□□ -1.84
CCM2-210ENST00000478169 MT1GP13640 62 aa3.54□□□□□ -1.84
CCM2-210ENST00000478169 MT4P47944 62 aa3.52□□□□□ -1.85
CCM2-210ENST00000478169 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
CCM2-210ENST00000478169 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
CCM2-210ENST00000478169 A0A0D9SG42 100 aa3.48□□□□□ -1.85
CCM2-210ENST00000478169 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
CCM2-210ENST00000478169 KRTAP19-5Q3LI72 72 aa3.46□□□□□ -1.86
CCM2-210ENST00000478169 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
CCM2-210ENST00000478169 MT1MQ8N339 61 aa3.45□□□□□ -1.86
CCM2-210ENST00000478169 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
CCM2-210ENST00000478169 MT1LQ93083 61 aa3.41□□□□□ -1.86
CCM2-210ENST00000478169 KRTAP5-7Q6L8G8 165 aa3.39□□□□□ -1.87
CCM2-210ENST00000478169 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
CCM2-210ENST00000478169 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
CCM2-210ENST00000478169 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CCM2-210ENST00000478169 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
CCM2-210ENST00000478169 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
CCM2-210ENST00000478169 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
CCM2-210ENST00000478169 SPRR5A0A1B0GTR4 108 aa3.24□□□□□ -1.89
CCM2-210ENST00000478169 TNP1P09430 55 aa3.22□□□□□ -1.89
CCM2-210ENST00000478169 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CCM2-210ENST00000478169 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
CCM2-210ENST00000478169 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CCM2-210ENST00000478169 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
CCM2-210ENST00000478169 KRTAP12-3P60328 96 aa3.15□□□□□ -1.91
CCM2-210ENST00000478169 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
CCM2-210ENST00000478169 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
CCM2-210ENST00000478169 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CCM2-210ENST00000478169 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CCM2-210ENST00000478169 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
CCM2-210ENST00000478169 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CCM2-210ENST00000478169 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CCM2-210ENST00000478169 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CCM2-210ENST00000478169 MT1AP04731 61 aa2.9□□□□□ -1.95
CCM2-210ENST00000478169 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
CCM2-210ENST00000478169 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
CCM2-210ENST00000478169 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
CCM2-210ENST00000478169 MT3P25713 68 aa2.86□□□□□ -1.95
CCM2-210ENST00000478169 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
CCM2-210ENST00000478169 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.96
CCM2-210ENST00000478169 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
CCM2-210ENST00000478169 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
CCM2-210ENST00000478169 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
CCM2-210ENST00000478169 INE1O15225 51 aa2.7□□□□□ -1.98
CCM2-210ENST00000478169 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
CCM2-210ENST00000478169 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
CCM2-210ENST00000478169 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
CCM2-210ENST00000478169 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
CCM2-210ENST00000478169 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
CCM2-210ENST00000478169 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CCM2-210ENST00000478169 PRM1P04553 51 aa1.82□□□□□ -2.12
CCM2-210ENST00000478169 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CCM2-210ENST00000478169 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CCM2-210ENST00000478169 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 345.8 ms