RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 V9GYY9 64 aa8.08□□□□□ -1.12
TRAF4-211ENST00000478021 GPR98Q8WXG9 6306 aa8.07□□□□□ -1.12
TRAF4-211ENST00000478021 MT1MQ8N339 61 aa8.05□□□□□ -1.12
TRAF4-211ENST00000478021 Q1T7F1 81 aa8.04□□□□□ -1.12
TRAF4-211ENST00000478021 KRTAP4-9Q9BYQ8 210 aa7.99□□□□□ -1.13
TRAF4-211ENST00000478021 K7ERS5 55 aa7.95□□□□□ -1.14
TRAF4-211ENST00000478021 KRTAP12-3P60328 96 aa7.92□□□□□ -1.14
TRAF4-211ENST00000478021 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
TRAF4-211ENST00000478021 KRTAP25-1Q3LHN0 102 aa7.88□□□□□ -1.15
TRAF4-211ENST00000478021 A6NED7 52 aa7.82□□□□□ -1.16
TRAF4-211ENST00000478021 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
TRAF4-211ENST00000478021 PCP4P48539 62 aa7.74□□□□□ -1.17
TRAF4-211ENST00000478021 LCE1DQ5T752 114 aa7.73□□□□□ -1.17
TRAF4-211ENST00000478021 RPS28P62857 69 aaKnown RBP7.68□□□□□ -1.18
TRAF4-211ENST00000478021 LCE4AQ5TA78 99 aa7.68□□□□□ -1.18
TRAF4-211ENST00000478021 MT4P47944 62 aa7.64□□□□□ -1.19
TRAF4-211ENST00000478021 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
TRAF4-211ENST00000478021 KRTAP5-4Q6L8H1 288 aa7.56□□□□□ -1.2
TRAF4-211ENST00000478021 CDC42SE1Q9NRR8 79 aa7.56□□□□□ -1.2
TRAF4-211ENST00000478021 AHNAK2Q8IVF2 5795 aa7.56□□□□□ -1.2
TRAF4-211ENST00000478021 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
TRAF4-211ENST00000478021 ROMO1P60602 79 aa7.46□□□□□ -1.22
TRAF4-211ENST00000478021 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
TRAF4-211ENST00000478021 KRTAP4-6Q9BYQ5 205 aa7.43□□□□□ -1.22
TRAF4-211ENST00000478021 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
TRAF4-211ENST00000478021 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
TRAF4-211ENST00000478021 KRTAP5-10Q6L8G5 202 aa7.34□□□□□ -1.23
TRAF4-211ENST00000478021 KRTAP5-5Q701N2 237 aaPredicted RBP7.34□□□□□ -1.23
TRAF4-211ENST00000478021 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
TRAF4-211ENST00000478021 KRTAP20-2Q3LI61 65 aa7.16□□□□□ -1.26
TRAF4-211ENST00000478021 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
TRAF4-211ENST00000478021 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
TRAF4-211ENST00000478021 KRTAP5-3Q6L8H2 238 aa7.1□□□□□ -1.27
TRAF4-211ENST00000478021 KRTAP5-7Q6L8G8 165 aa7.08□□□□□ -1.28
TRAF4-211ENST00000478021 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
TRAF4-211ENST00000478021 KRTAP9-6A8MVA2 160 aa6.92□□□□□ -1.3
TRAF4-211ENST00000478021 MT1AP04731 61 aa6.89□□□□□ -1.31
TRAF4-211ENST00000478021 KRTAP6-1Q3LI64 71 aa6.87□□□□□ -1.31
TRAF4-211ENST00000478021 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
TRAF4-211ENST00000478021 KRTAP5-2Q701N4 177 aa6.65□□□□□ -1.34
TRAF4-211ENST00000478021 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
TRAF4-211ENST00000478021 KRTAP6-2Q3LI66 62 aa6.53□□□□□ -1.36
TRAF4-211ENST00000478021 KRTAP4-11Q9BYQ6 195 aa6.49□□□□□ -1.37
TRAF4-211ENST00000478021 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
TRAF4-211ENST00000478021 KRTAP5-8O75690 187 aa6.31□□□□□ -1.4
TRAF4-211ENST00000478021 MT3P25713 68 aa6.29□□□□□ -1.4
TRAF4-211ENST00000478021 AHNAKQ09666 5890 aaKnown RBP6.25□□□□□ -1.41
TRAF4-211ENST00000478021 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
TRAF4-211ENST00000478021 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
TRAF4-211ENST00000478021 MUC5BQ9HC84 5762 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-211ENST00000478021 MUC5ACP98088 5654 aa6.17□□□□□ -1.42
TRAF4-211ENST00000478021 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
TRAF4-211ENST00000478021 KRTAP5-1Q6L8H4 278 aa5.95□□□□□ -1.46
TRAF4-211ENST00000478021 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
TRAF4-211ENST00000478021 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
TRAF4-211ENST00000478021 KTN1-AS1Q86SY8 53 aa5.7□□□□□ -1.5
TRAF4-211ENST00000478021 SVIPQ8NHG7 77 aa5.58□□□□□ -1.52
TRAF4-211ENST00000478021 LCE1BQ5T7P3 118 aa5.45□□□□□ -1.54
TRAF4-211ENST00000478021 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
TRAF4-211ENST00000478021 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
TRAF4-211ENST00000478021 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
TRAF4-211ENST00000478021 H3BS24 57 aa5.17□□□□□ -1.58
TRAF4-211ENST00000478021 LUZP6Q538Z0 58 aa5.16□□□□□ -1.58
TRAF4-211ENST00000478021 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
TRAF4-211ENST00000478021 LCE3EQ5T5B0 92 aa4.99□□□□□ -1.61
TRAF4-211ENST00000478021 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.83□□□□□ -1.64
TRAF4-211ENST00000478021 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
TRAF4-211ENST00000478021 LCE1FQ5T754 118 aa4.61□□□□□ -1.67
TRAF4-211ENST00000478021 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
TRAF4-211ENST00000478021 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
TRAF4-211ENST00000478021 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
TRAF4-211ENST00000478021 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
TRAF4-211ENST00000478021 PRM1P04553 51 aa3.85□□□□□ -1.79
TRAF4-211ENST00000478021 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
TRAF4-211ENST00000478021 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
TRAF4-211ENST00000478021 INE1O15225 51 aa3.33□□□□□ -1.88
TRAF4-211ENST00000478021 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
TRAF4-211ENST00000478021 MUC16Q8WXI7 14507 aa2.79□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 88.6 ms