RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 KRTAP12-2P59991 146 aa3.54□□□□□ -1.84
CD40-205ENST00000477696 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
CD40-205ENST00000477696 K7ERS5 55 aa3.52□□□□□ -1.85
CD40-205ENST00000477696 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
CD40-205ENST00000477696 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
CD40-205ENST00000477696 SPRR2EP22531 72 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 SPRR2BP35325 72 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 SPRR2AP35326 72 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
CD40-205ENST00000477696 A0A1B0GU33 70 aa3.48□□□□□ -1.85
CD40-205ENST00000477696 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
CD40-205ENST00000477696 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
CD40-205ENST00000477696 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
CD40-205ENST00000477696 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
CD40-205ENST00000477696 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
CD40-205ENST00000477696 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
CD40-205ENST00000477696 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
CD40-205ENST00000477696 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
CD40-205ENST00000477696 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
CD40-205ENST00000477696 A0A0D9SG42 100 aa3.38□□□□□ -1.87
CD40-205ENST00000477696 SPRR2DP22532 72 aa3.38□□□□□ -1.87
CD40-205ENST00000477696 SPINT4Q6UDR6 99 aa3.35□□□□□ -1.87
CD40-205ENST00000477696 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
CD40-205ENST00000477696 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
CD40-205ENST00000477696 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
CD40-205ENST00000477696 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
CD40-205ENST00000477696 MT1EP04732 61 aa3.19□□□□□ -1.9
CD40-205ENST00000477696 TNP1P09430 55 aa3.19□□□□□ -1.9
CD40-205ENST00000477696 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
CD40-205ENST00000477696 KRTAP19-5Q3LI72 72 aa3.16□□□□□ -1.9
CD40-205ENST00000477696 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
CD40-205ENST00000477696 MT1GP13640 62 aa3.12□□□□□ -1.91
CD40-205ENST00000477696 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
CD40-205ENST00000477696 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
CD40-205ENST00000477696 HMCN1Q96RW7 5635 aa3.1□□□□□ -1.91
CD40-205ENST00000477696 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
CD40-205ENST00000477696 MT1LQ93083 61 aa3.05□□□□□ -1.92
CD40-205ENST00000477696 MT1MQ8N339 61 aa3.03□□□□□ -1.92
CD40-205ENST00000477696 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
CD40-205ENST00000477696 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
CD40-205ENST00000477696 MT4P47944 62 aa2.98□□□□□ -1.93
CD40-205ENST00000477696 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
CD40-205ENST00000477696 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CD40-205ENST00000477696 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
CD40-205ENST00000477696 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
CD40-205ENST00000477696 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
CD40-205ENST00000477696 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
CD40-205ENST00000477696 INE1O15225 51 aa2.88□□□□□ -1.95
CD40-205ENST00000477696 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
CD40-205ENST00000477696 LCE3CQ5T5A8 94 aa2.78□□□□□ -1.96
CD40-205ENST00000477696 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CD40-205ENST00000477696 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
CD40-205ENST00000477696 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
CD40-205ENST00000477696 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
CD40-205ENST00000477696 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
CD40-205ENST00000477696 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
CD40-205ENST00000477696 MT1AP04731 61 aa2.61□□□□□ -1.99
CD40-205ENST00000477696 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -1.99
CD40-205ENST00000477696 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
CD40-205ENST00000477696 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
CD40-205ENST00000477696 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
CD40-205ENST00000477696 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
CD40-205ENST00000477696 MT3P25713 68 aa2.48□□□□□ -2.01
CD40-205ENST00000477696 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
CD40-205ENST00000477696 KRTAP6-2Q3LI66 62 aa2.46□□□□□ -2.02
CD40-205ENST00000477696 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
CD40-205ENST00000477696 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
CD40-205ENST00000477696 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
CD40-205ENST00000477696 LCE3DQ9BYE3 92 aa2.03□□□□□ -2.08
CD40-205ENST00000477696 LCE3EQ5T5B0 92 aa2.02□□□□□ -2.09
CD40-205ENST00000477696 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
CD40-205ENST00000477696 PRM1P04553 51 aa1.7□□□□□ -2.14
CD40-205ENST00000477696 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CD40-205ENST00000477696 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
CD40-205ENST00000477696 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
CD40-205ENST00000477696 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 375.6 ms