RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 KRTAP2-4Q9BYR9 128 aa7.16□□□□□ -1.26
LIMS2-214ENST00000476932 KRTAP2-1Q9BYU5 128 aa7.16□□□□□ -1.26
LIMS2-214ENST00000476932 FCGBPQ9Y6R7 5405 aaPredicted RBP7.01□□□□□ -1.29
LIMS2-214ENST00000476932 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
LIMS2-214ENST00000476932 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
LIMS2-214ENST00000476932 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
LIMS2-214ENST00000476932 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
LIMS2-214ENST00000476932 MT1MQ8N339 61 aa6.87□□□□□ -1.31
LIMS2-214ENST00000476932 MT1GP13640 62 aa6.81□□□□□ -1.32
LIMS2-214ENST00000476932 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
LIMS2-214ENST00000476932 LCE5AQ5TCM9 118 aa6.66□□□□□ -1.34
LIMS2-214ENST00000476932 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.35
LIMS2-214ENST00000476932 MACF1Q9UPN3 7388 aaKnown RBP6.63□□□□□ -1.35
LIMS2-214ENST00000476932 CRCT1Q9UGL9 99 aa6.6□□□□□ -1.35
LIMS2-214ENST00000476932 SYNE2Q8WXH0 6885 aaKnown RBP6.45□□□□□ -1.38
LIMS2-214ENST00000476932 DSTQ03001 7570 aaKnown RBP6.42□□□□□ -1.38
LIMS2-214ENST00000476932 KRTAP9-6A0A140TA67 174 aa6.37□□□□□ -1.39
LIMS2-214ENST00000476932 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
LIMS2-214ENST00000476932 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
LIMS2-214ENST00000476932 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
LIMS2-214ENST00000476932 LCE1AQ5T7P2 110 aa6.27□□□□□ -1.41
LIMS2-214ENST00000476932 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
LIMS2-214ENST00000476932 KRTAP6-1Q3LI64 71 aa6.22□□□□□ -1.41
LIMS2-214ENST00000476932 MT1AP04731 61 aa6.16□□□□□ -1.42
LIMS2-214ENST00000476932 SPRR2EP22531 72 aa6.15□□□□□ -1.43
LIMS2-214ENST00000476932 SPRR2BP35325 72 aa6.15□□□□□ -1.43
LIMS2-214ENST00000476932 SPRR2AP35326 72 aa6.15□□□□□ -1.43
LIMS2-214ENST00000476932 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.43
LIMS2-214ENST00000476932 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
LIMS2-214ENST00000476932 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
LIMS2-214ENST00000476932 KRTAP6-3Q3LI67 103 aa5.98□□□□□ -1.45
LIMS2-214ENST00000476932 SYNE1Q8NF91 8797 aaKnown RBP5.98□□□□□ -1.45
LIMS2-214ENST00000476932 SPRR2DP22532 72 aa5.9□□□□□ -1.46
LIMS2-214ENST00000476932 LCE3DQ9BYE3 92 aa5.88□□□□□ -1.47
LIMS2-214ENST00000476932 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
LIMS2-214ENST00000476932 KRTAP9-4Q9BYQ2 154 aa5.79□□□□□ -1.48
LIMS2-214ENST00000476932 KRTAP9-7A8MTY7 169 aa5.71□□□□□ -1.5
LIMS2-214ENST00000476932 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
LIMS2-214ENST00000476932 NEBP20929 6669 aa5.54□□□□□ -1.52
LIMS2-214ENST00000476932 PRM1P04553 51 aa5.53□□□□□ -1.52
LIMS2-214ENST00000476932 MT3P25713 68 aa5.5□□□□□ -1.53
LIMS2-214ENST00000476932 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
LIMS2-214ENST00000476932 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
LIMS2-214ENST00000476932 KRTAP4-6Q9BYQ5 205 aa5.2□□□□□ -1.58
LIMS2-214ENST00000476932 MT4P47944 62 aa5.18□□□□□ -1.58
LIMS2-214ENST00000476932 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
LIMS2-214ENST00000476932 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
LIMS2-214ENST00000476932 KRTAP5-2Q701N4 177 aa5.06□□□□□ -1.6
LIMS2-214ENST00000476932 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
LIMS2-214ENST00000476932 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
LIMS2-214ENST00000476932 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
LIMS2-214ENST00000476932 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
LIMS2-214ENST00000476932 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
LIMS2-214ENST00000476932 MUC5ACP98088 5654 aa4.69□□□□□ -1.66
LIMS2-214ENST00000476932 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
LIMS2-214ENST00000476932 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
LIMS2-214ENST00000476932 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
LIMS2-214ENST00000476932 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
LIMS2-214ENST00000476932 KRTAP4-2Q9BYR5 136 aa4.34□□□□□ -1.71
LIMS2-214ENST00000476932 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
LIMS2-214ENST00000476932 LCE1CQ5T751 118 aa4.29□□□□□ -1.72
LIMS2-214ENST00000476932 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
LIMS2-214ENST00000476932 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
LIMS2-214ENST00000476932 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
LIMS2-214ENST00000476932 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
LIMS2-214ENST00000476932 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
LIMS2-214ENST00000476932 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
LIMS2-214ENST00000476932 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
LIMS2-214ENST00000476932 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
LIMS2-214ENST00000476932 MUC5BQ9HC84 5762 aaPredicted RBP3.6□□□□□ -1.83
LIMS2-214ENST00000476932 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
LIMS2-214ENST00000476932 KRTAP21-1Q3LI58 79 aa3.5□□□□□ -1.85
LIMS2-214ENST00000476932 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.85
LIMS2-214ENST00000476932 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
LIMS2-214ENST00000476932 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
LIMS2-214ENST00000476932 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
LIMS2-214ENST00000476932 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
LIMS2-214ENST00000476932 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 91.8 ms