RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
CCM2-208ENST00000476594 TMEM258P61165 79 aa3.86□□□□□ -1.79
CCM2-208ENST00000476594 A8MU10 97 aa3.83□□□□□ -1.8
CCM2-208ENST00000476594 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
CCM2-208ENST00000476594 TNP1P09430 55 aa3.81□□□□□ -1.8
CCM2-208ENST00000476594 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
CCM2-208ENST00000476594 UQCR11O14957 56 aa3.79□□□□□ -1.8
CCM2-208ENST00000476594 MT1EP04732 61 aa3.79□□□□□ -1.8
CCM2-208ENST00000476594 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
CCM2-208ENST00000476594 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
CCM2-208ENST00000476594 PCP4P48539 62 aa3.76□□□□□ -1.81
CCM2-208ENST00000476594 AHNAK2Q8IVF2 5795 aa3.76□□□□□ -1.81
CCM2-208ENST00000476594 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
CCM2-208ENST00000476594 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
CCM2-208ENST00000476594 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
CCM2-208ENST00000476594 MT1GP13640 62 aa3.72□□□□□ -1.81
CCM2-208ENST00000476594 K7ERS5 55 aa3.71□□□□□ -1.82
CCM2-208ENST00000476594 C10orf95Q9H7T3 257 aa3.71□□□□□ -1.82
CCM2-208ENST00000476594 V9GYY9 64 aa3.71□□□□□ -1.82
CCM2-208ENST00000476594 HMCN1Q96RW7 5635 aa3.69□□□□□ -1.82
CCM2-208ENST00000476594 MIR22HGQ0VDD5 57 aa3.68□□□□□ -1.82
CCM2-208ENST00000476594 LCE3AQ5TA76 89 aa3.68□□□□□ -1.82
CCM2-208ENST00000476594 MT1LQ93083 61 aa3.63□□□□□ -1.83
CCM2-208ENST00000476594 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
CCM2-208ENST00000476594 MT1MQ8N339 61 aa3.61□□□□□ -1.83
CCM2-208ENST00000476594 Q1T7F1 81 aa3.6□□□□□ -1.83
CCM2-208ENST00000476594 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
CCM2-208ENST00000476594 PSPHP1O15172 72 aa3.59□□□□□ -1.83
CCM2-208ENST00000476594 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
CCM2-208ENST00000476594 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CCM2-208ENST00000476594 A6NED7 52 aa3.52□□□□□ -1.85
CCM2-208ENST00000476594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.5□□□□□ -1.85
CCM2-208ENST00000476594 RPS28P62857 69 aaKnown RBP3.48□□□□□ -1.85
CCM2-208ENST00000476594 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
CCM2-208ENST00000476594 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CCM2-208ENST00000476594 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CCM2-208ENST00000476594 MT4P47944 62 aa3.44□□□□□ -1.86
CCM2-208ENST00000476594 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
CCM2-208ENST00000476594 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CCM2-208ENST00000476594 ROMO1P60602 79 aa3.37□□□□□ -1.87
CCM2-208ENST00000476594 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
CCM2-208ENST00000476594 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
CCM2-208ENST00000476594 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
CCM2-208ENST00000476594 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
CCM2-208ENST00000476594 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
CCM2-208ENST00000476594 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
CCM2-208ENST00000476594 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
CCM2-208ENST00000476594 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
CCM2-208ENST00000476594 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
CCM2-208ENST00000476594 A0A0A0MQY5 61 aa3.16□□□□□ -1.9
CCM2-208ENST00000476594 MT1AP04731 61 aa3.11□□□□□ -1.91
CCM2-208ENST00000476594 MT3P25713 68 aa3.09□□□□□ -1.91
CCM2-208ENST00000476594 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
CCM2-208ENST00000476594 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CCM2-208ENST00000476594 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CCM2-208ENST00000476594 PMAIP1Q13794 54 aa3□□□□□ -1.93
CCM2-208ENST00000476594 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CCM2-208ENST00000476594 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
CCM2-208ENST00000476594 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
CCM2-208ENST00000476594 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
CCM2-208ENST00000476594 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
CCM2-208ENST00000476594 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.96
CCM2-208ENST00000476594 KTN1-AS1Q86SY8 53 aa2.8□□□□□ -1.96
CCM2-208ENST00000476594 PRAC1Q96KF2 57 aa2.8□□□□□ -1.96
CCM2-208ENST00000476594 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
CCM2-208ENST00000476594 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
CCM2-208ENST00000476594 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
CCM2-208ENST00000476594 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
CCM2-208ENST00000476594 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
CCM2-208ENST00000476594 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
CCM2-208ENST00000476594 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
CCM2-208ENST00000476594 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
CCM2-208ENST00000476594 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CCM2-208ENST00000476594 INE1O15225 51 aa1.77□□□□□ -2.13
CCM2-208ENST00000476594 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CCM2-208ENST00000476594 PRM1P04553 51 aa1.69□□□□□ -2.14
CCM2-208ENST00000476594 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
CCM2-208ENST00000476594 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 71.8 ms