RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
TTC38-206ENST00000475467 HMCN1Q96RW7 5635 aa4.38□□□□□ -1.71
TTC38-206ENST00000475467 MT1LQ93083 61 aa4.36□□□□□ -1.71
TTC38-206ENST00000475467 UQCR11O14957 56 aa4.3□□□□□ -1.72
TTC38-206ENST00000475467 TNP1P09430 55 aa4.3□□□□□ -1.72
TTC38-206ENST00000475467 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
TTC38-206ENST00000475467 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
TTC38-206ENST00000475467 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
TTC38-206ENST00000475467 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
TTC38-206ENST00000475467 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
TTC38-206ENST00000475467 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
TTC38-206ENST00000475467 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
TTC38-206ENST00000475467 KRTAP4-3Q9BYR4 195 aa4.2□□□□□ -1.74
TTC38-206ENST00000475467 V9GYY9 64 aa4.2□□□□□ -1.74
TTC38-206ENST00000475467 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
TTC38-206ENST00000475467 K7ERS5 55 aa4.16□□□□□ -1.74
TTC38-206ENST00000475467 PSPHP1O15172 72 aa4.15□□□□□ -1.75
TTC38-206ENST00000475467 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
TTC38-206ENST00000475467 Q1T7F1 81 aa4.13□□□□□ -1.75
TTC38-206ENST00000475467 KRTAP12-4P60329 112 aa4.12□□□□□ -1.75
TTC38-206ENST00000475467 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
TTC38-206ENST00000475467 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
TTC38-206ENST00000475467 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
TTC38-206ENST00000475467 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
TTC38-206ENST00000475467 A6NED7 52 aa4.03□□□□□ -1.76
TTC38-206ENST00000475467 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
TTC38-206ENST00000475467 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
TTC38-206ENST00000475467 PCP4P48539 62 aa3.95□□□□□ -1.78
TTC38-206ENST00000475467 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
TTC38-206ENST00000475467 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
TTC38-206ENST00000475467 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
TTC38-206ENST00000475467 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
TTC38-206ENST00000475467 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
TTC38-206ENST00000475467 ROMO1P60602 79 aa3.84□□□□□ -1.79
TTC38-206ENST00000475467 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
TTC38-206ENST00000475467 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
TTC38-206ENST00000475467 LCE3CQ5T5A8 94 aa3.75□□□□□ -1.81
TTC38-206ENST00000475467 MT1AP04731 61 aa3.74□□□□□ -1.81
TTC38-206ENST00000475467 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
TTC38-206ENST00000475467 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
TTC38-206ENST00000475467 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
TTC38-206ENST00000475467 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
TTC38-206ENST00000475467 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
TTC38-206ENST00000475467 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
TTC38-206ENST00000475467 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
TTC38-206ENST00000475467 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
TTC38-206ENST00000475467 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
TTC38-206ENST00000475467 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
TTC38-206ENST00000475467 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
TTC38-206ENST00000475467 MT3P25713 68 aa3.47□□□□□ -1.85
TTC38-206ENST00000475467 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
TTC38-206ENST00000475467 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
TTC38-206ENST00000475467 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
TTC38-206ENST00000475467 PRAC1Q96KF2 57 aa3.16□□□□□ -1.9
TTC38-206ENST00000475467 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
TTC38-206ENST00000475467 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
TTC38-206ENST00000475467 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
TTC38-206ENST00000475467 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
TTC38-206ENST00000475467 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
TTC38-206ENST00000475467 SVIPQ8NHG7 77 aa2.85□□□□□ -1.95
TTC38-206ENST00000475467 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
TTC38-206ENST00000475467 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
TTC38-206ENST00000475467 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TTC38-206ENST00000475467 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
TTC38-206ENST00000475467 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
TTC38-206ENST00000475467 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
TTC38-206ENST00000475467 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
TTC38-206ENST00000475467 PHGR1C9JFL3 82 aa2.57□□□□□ -2
TTC38-206ENST00000475467 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
TTC38-206ENST00000475467 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
TTC38-206ENST00000475467 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
TTC38-206ENST00000475467 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
TTC38-206ENST00000475467 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
TTC38-206ENST00000475467 PRM1P04553 51 aa1.96□□□□□ -2.1
TTC38-206ENST00000475467 A0A0A0MQY5 61 aa1.74□□□□□ -2.13
TTC38-206ENST00000475467 INE1O15225 51 aa1.74□□□□□ -2.13
TTC38-206ENST00000475467 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
TTC38-206ENST00000475467 H3BS24 57 aa0.76□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 117 ms