RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MUC12Q9UKN1 5478 aa4.95□□□□□ -1.62
TRAF4-210ENST00000475329 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
TRAF4-210ENST00000475329 MT1LQ93083 61 aa4.9□□□□□ -1.63
TRAF4-210ENST00000475329 KRTAP2-3P0C7H8 128 aa4.87□□□□□ -1.63
TRAF4-210ENST00000475329 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
TRAF4-210ENST00000475329 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
TRAF4-210ENST00000475329 SPRR2EP22531 72 aa4.84□□□□□ -1.63
TRAF4-210ENST00000475329 SPRR2BP35325 72 aa4.84□□□□□ -1.63
TRAF4-210ENST00000475329 SPRR2AP35326 72 aa4.84□□□□□ -1.63
TRAF4-210ENST00000475329 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
TRAF4-210ENST00000475329 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
TRAF4-210ENST00000475329 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
TRAF4-210ENST00000475329 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
TRAF4-210ENST00000475329 MT1GP13640 62 aa4.77□□□□□ -1.65
TRAF4-210ENST00000475329 LCE5AQ5TCM9 118 aa4.72□□□□□ -1.65
TRAF4-210ENST00000475329 MT1MQ8N339 61 aa4.71□□□□□ -1.66
TRAF4-210ENST00000475329 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
TRAF4-210ENST00000475329 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
TRAF4-210ENST00000475329 KRTAP2-2Q9BYT5 123 aa4.7□□□□□ -1.66
TRAF4-210ENST00000475329 KRTAP2-1Q9BYU5 128 aa4.7□□□□□ -1.66
TRAF4-210ENST00000475329 SPRR2DP22532 72 aa4.69□□□□□ -1.66
TRAF4-210ENST00000475329 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
TRAF4-210ENST00000475329 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
TRAF4-210ENST00000475329 LCE3BQ5TA77 95 aa4.55□□□□□ -1.68
TRAF4-210ENST00000475329 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
TRAF4-210ENST00000475329 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
TRAF4-210ENST00000475329 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
TRAF4-210ENST00000475329 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
TRAF4-210ENST00000475329 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
TRAF4-210ENST00000475329 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
TRAF4-210ENST00000475329 MT1AP04731 61 aa4.18□□□□□ -1.74
TRAF4-210ENST00000475329 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
TRAF4-210ENST00000475329 GPR98Q8WXG9 6306 aa4.15□□□□□ -1.74
TRAF4-210ENST00000475329 KRTAP6-1Q3LI64 71 aa4.11□□□□□ -1.75
TRAF4-210ENST00000475329 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
TRAF4-210ENST00000475329 MT4P47944 62 aa4.07□□□□□ -1.76
TRAF4-210ENST00000475329 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
TRAF4-210ENST00000475329 A0A0A0MQY5 61 aa3.97□□□□□ -1.77
TRAF4-210ENST00000475329 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
TRAF4-210ENST00000475329 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
TRAF4-210ENST00000475329 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
TRAF4-210ENST00000475329 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
TRAF4-210ENST00000475329 H3BS24 57 aa3.89□□□□□ -1.79
TRAF4-210ENST00000475329 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
TRAF4-210ENST00000475329 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
TRAF4-210ENST00000475329 AHNAK2Q8IVF2 5795 aa3.81□□□□□ -1.8
TRAF4-210ENST00000475329 KRTAP20-2Q3LI61 65 aa3.81□□□□□ -1.8
TRAF4-210ENST00000475329 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
TRAF4-210ENST00000475329 MT3P25713 68 aa3.78□□□□□ -1.8
TRAF4-210ENST00000475329 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
TRAF4-210ENST00000475329 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
TRAF4-210ENST00000475329 INE1O15225 51 aa3.73□□□□□ -1.81
TRAF4-210ENST00000475329 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
TRAF4-210ENST00000475329 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
TRAF4-210ENST00000475329 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
TRAF4-210ENST00000475329 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
TRAF4-210ENST00000475329 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
TRAF4-210ENST00000475329 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
TRAF4-210ENST00000475329 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
TRAF4-210ENST00000475329 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TRAF4-210ENST00000475329 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
TRAF4-210ENST00000475329 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
TRAF4-210ENST00000475329 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
TRAF4-210ENST00000475329 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
TRAF4-210ENST00000475329 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
TRAF4-210ENST00000475329 PRM1P04553 51 aa3.06□□□□□ -1.92
TRAF4-210ENST00000475329 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
TRAF4-210ENST00000475329 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
TRAF4-210ENST00000475329 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
TRAF4-210ENST00000475329 KRTAP5-11Q6L8G4 156 aa2.71□□□□□ -1.98
TRAF4-210ENST00000475329 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
TRAF4-210ENST00000475329 LCE1FQ5T754 118 aa2.55□□□□□ -2
TRAF4-210ENST00000475329 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
TRAF4-210ENST00000475329 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TRAF4-210ENST00000475329 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
TRAF4-210ENST00000475329 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
TRAF4-210ENST00000475329 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TRAF4-210ENST00000475329 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms