RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 TNP1P09430 55 aa6.03□□□□□ -1.44
SRM-204ENST00000475189 MT1EP04732 61 aa6.02□□□□□ -1.45
SRM-204ENST00000475189 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
SRM-204ENST00000475189 A6NED7 52 aa5.98□□□□□ -1.45
SRM-204ENST00000475189 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
SRM-204ENST00000475189 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
SRM-204ENST00000475189 KRTAP19-3Q7Z4W3 81 aa5.93□□□□□ -1.46
SRM-204ENST00000475189 LCE3BQ5TA77 95 aa5.92□□□□□ -1.46
SRM-204ENST00000475189 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
SRM-204ENST00000475189 PRO0628Q9UI54 55 aa5.92□□□□□ -1.46
SRM-204ENST00000475189 NDUFAF8A1L188 74 aa5.91□□□□□ -1.46
SRM-204ENST00000475189 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
SRM-204ENST00000475189 K7ERS5 55 aa5.89□□□□□ -1.47
SRM-204ENST00000475189 MT1GP13640 62 aa5.81□□□□□ -1.48
SRM-204ENST00000475189 MT1LQ93083 61 aa5.8□□□□□ -1.48
SRM-204ENST00000475189 KRTAP25-1Q3LHN0 102 aa5.79□□□□□ -1.48
SRM-204ENST00000475189 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
SRM-204ENST00000475189 DSTQ03001 7570 aaKnown RBP5.76□□□□□ -1.49
SRM-204ENST00000475189 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
SRM-204ENST00000475189 MT1MQ8N339 61 aa5.72□□□□□ -1.49
SRM-204ENST00000475189 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
SRM-204ENST00000475189 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
SRM-204ENST00000475189 PMAIP1Q13794 54 aa5.62□□□□□ -1.51
SRM-204ENST00000475189 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
SRM-204ENST00000475189 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
SRM-204ENST00000475189 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
SRM-204ENST00000475189 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SRM-204ENST00000475189 ROMO1P60602 79 aa5.55□□□□□ -1.52
SRM-204ENST00000475189 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
SRM-204ENST00000475189 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
SRM-204ENST00000475189 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
SRM-204ENST00000475189 KTN1-AS1Q86SY8 53 aa5.42□□□□□ -1.54
SRM-204ENST00000475189 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
SRM-204ENST00000475189 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
SRM-204ENST00000475189 MT4P47944 62 aa5.33□□□□□ -1.56
SRM-204ENST00000475189 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
SRM-204ENST00000475189 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
SRM-204ENST00000475189 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
SRM-204ENST00000475189 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
SRM-204ENST00000475189 MT3P25713 68 aa5.23□□□□□ -1.57
SRM-204ENST00000475189 KRTAP5-5Q701N2 237 aaPredicted RBP5.23□□□□□ -1.57
SRM-204ENST00000475189 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
SRM-204ENST00000475189 KRTAP5-10Q6L8G5 202 aa5.2□□□□□ -1.58
SRM-204ENST00000475189 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
SRM-204ENST00000475189 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
SRM-204ENST00000475189 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
SRM-204ENST00000475189 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
SRM-204ENST00000475189 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
SRM-204ENST00000475189 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
SRM-204ENST00000475189 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
SRM-204ENST00000475189 MT1AP04731 61 aa4.93□□□□□ -1.62
SRM-204ENST00000475189 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.63
SRM-204ENST00000475189 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
SRM-204ENST00000475189 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
SRM-204ENST00000475189 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
SRM-204ENST00000475189 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
SRM-204ENST00000475189 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
SRM-204ENST00000475189 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
SRM-204ENST00000475189 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
SRM-204ENST00000475189 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
SRM-204ENST00000475189 MUC5ACP98088 5654 aa4.35□□□□□ -1.71
SRM-204ENST00000475189 KRTAP5-1Q6L8H4 278 aa4.2□□□□□ -1.74
SRM-204ENST00000475189 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
SRM-204ENST00000475189 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
SRM-204ENST00000475189 LCE3EQ5T5B0 92 aa3.9□□□□□ -1.79
SRM-204ENST00000475189 INE1O15225 51 aa3.86□□□□□ -1.79
SRM-204ENST00000475189 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
SRM-204ENST00000475189 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
SRM-204ENST00000475189 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
SRM-204ENST00000475189 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
SRM-204ENST00000475189 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
SRM-204ENST00000475189 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SRM-204ENST00000475189 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
SRM-204ENST00000475189 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SRM-204ENST00000475189 PRM1P04553 51 aa2.85□□□□□ -1.95
SRM-204ENST00000475189 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
SRM-204ENST00000475189 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
SRM-204ENST00000475189 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms