RNA–Protein interactions for RNA: ENST00000472962.1

CCDC142-205, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 645 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-205ENST00000472962 MT1LQ93083 61 aa5.47□□□□□ -1.53
CCDC142-205ENST00000472962 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
CCDC142-205ENST00000472962 SPRR5A0A1B0GTR4 108 aa5.45□□□□□ -1.54
CCDC142-205ENST00000472962 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
CCDC142-205ENST00000472962 V9GYY9 64 aa5.4□□□□□ -1.54
CCDC142-205ENST00000472962 COA5Q86WW8 74 aa5.36□□□□□ -1.55
CCDC142-205ENST00000472962 SEC61GP60059 68 aa5.34□□□□□ -1.55
CCDC142-205ENST00000472962 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
CCDC142-205ENST00000472962 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
CCDC142-205ENST00000472962 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
CCDC142-205ENST00000472962 LINC01558Q9Y6Z2 57 aa5.29□□□□□ -1.56
CCDC142-205ENST00000472962 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
CCDC142-205ENST00000472962 LCE3AQ5TA76 89 aa5.27□□□□□ -1.57
CCDC142-205ENST00000472962 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
CCDC142-205ENST00000472962 A0A1B0GU33 70 aa5.22□□□□□ -1.57
CCDC142-205ENST00000472962 PSPHP1O15172 72 aa5.22□□□□□ -1.57
CCDC142-205ENST00000472962 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
CCDC142-205ENST00000472962 TNP1P09430 55 aa5.2□□□□□ -1.58
CCDC142-205ENST00000472962 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
CCDC142-205ENST00000472962 KRTAP12-4P60329 112 aa5.19□□□□□ -1.58
CCDC142-205ENST00000472962 PRR15LQ9BU68 103 aa5.19□□□□□ -1.58
CCDC142-205ENST00000472962 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
CCDC142-205ENST00000472962 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
CCDC142-205ENST00000472962 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
CCDC142-205ENST00000472962 A6NED7 52 aa5.06□□□□□ -1.6
CCDC142-205ENST00000472962 A8MU10 97 aa5.05□□□□□ -1.6
CCDC142-205ENST00000472962 A0A1B0GU69 56 aa5.02□□□□□ -1.61
CCDC142-205ENST00000472962 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CCDC142-205ENST00000472962 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
CCDC142-205ENST00000472962 UQCR11O14957 56 aa4.95□□□□□ -1.62
CCDC142-205ENST00000472962 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
CCDC142-205ENST00000472962 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
CCDC142-205ENST00000472962 MIR22HGQ0VDD5 57 aa4.9□□□□□ -1.63
CCDC142-205ENST00000472962 KTN1-AS1Q86SY8 53 aa4.89□□□□□ -1.63
CCDC142-205ENST00000472962 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
CCDC142-205ENST00000472962 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
CCDC142-205ENST00000472962 MUC5ACP98088 5654 aa4.7□□□□□ -1.66
CCDC142-205ENST00000472962 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
CCDC142-205ENST00000472962 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
CCDC142-205ENST00000472962 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
CCDC142-205ENST00000472962 KRTAP25-1Q3LHN0 102 aa4.66□□□□□ -1.66
CCDC142-205ENST00000472962 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
CCDC142-205ENST00000472962 MT1AP04731 61 aa4.65□□□□□ -1.67
CCDC142-205ENST00000472962 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
CCDC142-205ENST00000472962 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
CCDC142-205ENST00000472962 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
CCDC142-205ENST00000472962 K7ERS5 55 aa4.59□□□□□ -1.67
CCDC142-205ENST00000472962 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CCDC142-205ENST00000472962 KRTAP15-1Q3LI76 137 aa4.58□□□□□ -1.68
CCDC142-205ENST00000472962 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
CCDC142-205ENST00000472962 KRTAP9-4Q9BYQ2 154 aa4.55□□□□□ -1.68
CCDC142-205ENST00000472962 ROMO1P60602 79 aa4.51□□□□□ -1.69
CCDC142-205ENST00000472962 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
CCDC142-205ENST00000472962 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
CCDC142-205ENST00000472962 MT3P25713 68 aa4.31□□□□□ -1.72
CCDC142-205ENST00000472962 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
CCDC142-205ENST00000472962 LCE1EQ5T753 118 aa4□□□□□ -1.77
CCDC142-205ENST00000472962 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CCDC142-205ENST00000472962 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
CCDC142-205ENST00000472962 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
CCDC142-205ENST00000472962 H3BS24 57 aa3.76□□□□□ -1.81
CCDC142-205ENST00000472962 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CCDC142-205ENST00000472962 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
CCDC142-205ENST00000472962 LUZP6Q538Z0 58 aa3.66□□□□□ -1.82
CCDC142-205ENST00000472962 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
CCDC142-205ENST00000472962 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
CCDC142-205ENST00000472962 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
CCDC142-205ENST00000472962 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
CCDC142-205ENST00000472962 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
CCDC142-205ENST00000472962 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
CCDC142-205ENST00000472962 INE1O15225 51 aa3.21□□□□□ -1.9
CCDC142-205ENST00000472962 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
CCDC142-205ENST00000472962 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
CCDC142-205ENST00000472962 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
CCDC142-205ENST00000472962 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
CCDC142-205ENST00000472962 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
CCDC142-205ENST00000472962 PRM1P04553 51 aa2.34□□□□□ -2.03
CCDC142-205ENST00000472962 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 1565.9 ms