RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 LINC00643Q86TS7 51 aa1.37□□□□□ -2.19
XRN1-209ENST00000472625 CHKB-CPT1BH3BT56 60 aa1.35□□□□□ -2.19
XRN1-209ENST00000472625 SCGB1A1P11684 91 aa1.35□□□□□ -2.19
XRN1-209ENST00000472625 ACYP2P14621 99 aa1.35□□□□□ -2.19
XRN1-209ENST00000472625 CAMK2N1Q7Z7J9 78 aa1.35□□□□□ -2.19
XRN1-209ENST00000472625 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
XRN1-209ENST00000472625 J3QR89 54 aa1.33□□□□□ -2.2
XRN1-209ENST00000472625 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
XRN1-209ENST00000472625 SMIM20Q8N5G0 67 aa1.32□□□□□ -2.2
XRN1-209ENST00000472625 CYSTM1Q9H1C7 97 aa1.31□□□□□ -2.2
XRN1-209ENST00000472625 LOC105371267A0A1B0GV96 52 aa1.3□□□□□ -2.2
XRN1-209ENST00000472625 MT1EP04732 61 aa1.3□□□□□ -2.2
XRN1-209ENST00000472625 SEC61GP60059 68 aa1.3□□□□□ -2.2
XRN1-209ENST00000472625 MT1GP13640 62 aa1.29□□□□□ -2.2
XRN1-209ENST00000472625 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
XRN1-209ENST00000472625 SERP1Q9Y6X1 66 aa1.28□□□□□ -2.2
XRN1-209ENST00000472625 SPANXA2-OT1Q8N9U9 137 aa1.27□□□□□ -2.21
XRN1-209ENST00000472625 A0A0D9SG42 100 aa1.26□□□□□ -2.21
XRN1-209ENST00000472625 PCP4L1A6NKN8 68 aa1.26□□□□□ -2.21
XRN1-209ENST00000472625 MT4P47944 62 aa1.25□□□□□ -2.21
XRN1-209ENST00000472625 KRTAP5-10Q6L8G5 202 aa1.24□□□□□ -2.21
XRN1-209ENST00000472625 SPINT4Q6UDR6 99 aa1.24□□□□□ -2.21
XRN1-209ENST00000472625 SMIM26A0A096LP01 95 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 KRTAP21-2Q3LI59 83 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 KRTAP19-5Q3LI72 72 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 KRTAP13-4Q3LI77 160 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 MT1MQ8N339 61 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
XRN1-209ENST00000472625 A0A1B0GU33 70 aa1.22□□□□□ -2.21
XRN1-209ENST00000472625 TNP1P09430 55 aa1.22□□□□□ -2.21
XRN1-209ENST00000472625 MT1LQ93083 61 aa1.22□□□□□ -2.21
XRN1-209ENST00000472625 A0A1B0GV90 55 aa1.21□□□□□ -2.22
XRN1-209ENST00000472625 K7ERU9 68 aa1.21□□□□□ -2.22
XRN1-209ENST00000472625 COA5Q86WW8 74 aa1.21□□□□□ -2.22
XRN1-209ENST00000472625 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
XRN1-209ENST00000472625 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
XRN1-209ENST00000472625 KRTAP12-4P60329 112 aa1.19□□□□□ -2.22
XRN1-209ENST00000472625 SPATA8Q6RVD6 105 aa1.19□□□□□ -2.22
XRN1-209ENST00000472625 SERP2Q8N6R1 65 aa1.19□□□□□ -2.22
XRN1-209ENST00000472625 A0A1B0GU69 56 aa1.18□□□□□ -2.22
XRN1-209ENST00000472625 PRR15LQ9BU68 103 aa1.18□□□□□ -2.22
XRN1-209ENST00000472625 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
XRN1-209ENST00000472625 AHNAKQ09666 5890 aaKnown RBP1.16□□□□□ -2.22
XRN1-209ENST00000472625 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
XRN1-209ENST00000472625 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
XRN1-209ENST00000472625 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
XRN1-209ENST00000472625 K7ERS5 55 aa1.12□□□□□ -2.23
XRN1-209ENST00000472625 COX7CP15954 63 aa1.12□□□□□ -2.23
XRN1-209ENST00000472625 ATP5EP56381 51 aaPredicted RBP1.12□□□□□ -2.23
XRN1-209ENST00000472625 KRTAP25-1Q3LHN0 102 aa1.12□□□□□ -2.23
XRN1-209ENST00000472625 H7BZZ5 65 aa1.11□□□□□ -2.23
XRN1-209ENST00000472625 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
XRN1-209ENST00000472625 UQCR11O14957 56 aa1.1□□□□□ -2.23
XRN1-209ENST00000472625 LINC01558Q9Y6Z2 57 aa1.06□□□□□ -2.24
XRN1-209ENST00000472625 MT1AP04731 61 aa1.05□□□□□ -2.24
XRN1-209ENST00000472625 ANAPC13Q9BS18 74 aa1.05□□□□□ -2.24
XRN1-209ENST00000472625 MIR22HGQ0VDD5 57 aa1.04□□□□□ -2.24
XRN1-209ENST00000472625 TMEM258P61165 79 aa1.02□□□□□ -2.25
XRN1-209ENST00000472625 RPS28P62857 69 aaKnown RBP1.02□□□□□ -2.25
XRN1-209ENST00000472625 V9GYY9 64 aa1.02□□□□□ -2.25
XRN1-209ENST00000472625 KRTAP6-1Q3LI64 71 aa1.01□□□□□ -2.25
XRN1-209ENST00000472625 CDC42SE1Q9NRR8 79 aa1.01□□□□□ -2.25
XRN1-209ENST00000472625 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
XRN1-209ENST00000472625 CCDC179H3BU77 68 aa0.97□□□□□ -2.25
XRN1-209ENST00000472625 ROMO1P60602 79 aa0.96□□□□□ -2.26
XRN1-209ENST00000472625 Q1T7F1 81 aa0.96□□□□□ -2.26
XRN1-209ENST00000472625 A6NED7 52 aa0.95□□□□□ -2.26
XRN1-209ENST00000472625 PSPHP1O15172 72 aa0.94□□□□□ -2.26
XRN1-209ENST00000472625 BRK1Q8WUW1 75 aa0.77□□□□□ -2.29
XRN1-209ENST00000472625 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
XRN1-209ENST00000472625 LUZP6Q538Z0 58 aa0.71□□□□□ -2.3
XRN1-209ENST00000472625 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
XRN1-209ENST00000472625 PMAIP1Q13794 54 aa0.66□□□□□ -2.3
XRN1-209ENST00000472625 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
XRN1-209ENST00000472625 PRO0628Q9UI54 55 aa0.57□□□□□ -2.32
XRN1-209ENST00000472625 KTN1-AS1Q86SY8 53 aa0.55□□□□□ -2.32
XRN1-209ENST00000472625 PRM1P04553 51 aa0.46□□□□□ -2.34
XRN1-209ENST00000472625 INE1O15225 51 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 76.9 ms