RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 A0A0D9SG42 100 aa3.78□□□□□ -1.8
SMC4-213ENST00000472282 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
SMC4-213ENST00000472282 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
SMC4-213ENST00000472282 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
SMC4-213ENST00000472282 SPRR2EP22531 72 aa3.72□□□□□ -1.81
SMC4-213ENST00000472282 SPRR2BP35325 72 aa3.72□□□□□ -1.81
SMC4-213ENST00000472282 SPRR2AP35326 72 aa3.72□□□□□ -1.81
SMC4-213ENST00000472282 SMIM26A0A096LP01 95 aa3.71□□□□□ -1.82
SMC4-213ENST00000472282 A8MU10 97 aa3.71□□□□□ -1.82
SMC4-213ENST00000472282 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 KRTAP12-1P59990 96 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 SPINT4Q6UDR6 99 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
SMC4-213ENST00000472282 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
SMC4-213ENST00000472282 V9GYY9 64 aa3.68□□□□□ -1.82
SMC4-213ENST00000472282 UQCR11O14957 56 aa3.66□□□□□ -1.82
SMC4-213ENST00000472282 Q1T7F1 81 aa3.66□□□□□ -1.82
SMC4-213ENST00000472282 PSPHP1O15172 72 aa3.65□□□□□ -1.83
SMC4-213ENST00000472282 RPS28P62857 69 aaKnown RBP3.63□□□□□ -1.83
SMC4-213ENST00000472282 MIR22HGQ0VDD5 57 aa3.6□□□□□ -1.83
SMC4-213ENST00000472282 SPRR2DP22532 72 aa3.59□□□□□ -1.83
SMC4-213ENST00000472282 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
SMC4-213ENST00000472282 A6NED7 52 aa3.54□□□□□ -1.84
SMC4-213ENST00000472282 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
SMC4-213ENST00000472282 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
SMC4-213ENST00000472282 K7ERS5 55 aa3.48□□□□□ -1.85
SMC4-213ENST00000472282 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
SMC4-213ENST00000472282 TNP1P09430 55 aa3.46□□□□□ -1.86
SMC4-213ENST00000472282 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
SMC4-213ENST00000472282 CDC42SE1Q9NRR8 79 aa3.42□□□□□ -1.86
SMC4-213ENST00000472282 KRTAP19-7Q3SYF9 63 aa3.41□□□□□ -1.86
SMC4-213ENST00000472282 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SMC4-213ENST00000472282 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SMC4-213ENST00000472282 MT1EP04732 61 aa3.37□□□□□ -1.87
SMC4-213ENST00000472282 KRTAP19-5Q3LI72 72 aa3.37□□□□□ -1.87
SMC4-213ENST00000472282 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
SMC4-213ENST00000472282 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
SMC4-213ENST00000472282 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
SMC4-213ENST00000472282 ROMO1P60602 79 aa3.3□□□□□ -1.88
SMC4-213ENST00000472282 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
SMC4-213ENST00000472282 BRK1Q8WUW1 75 aa3.26□□□□□ -1.89
SMC4-213ENST00000472282 MT1GP13640 62 aa3.24□□□□□ -1.89
SMC4-213ENST00000472282 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
SMC4-213ENST00000472282 MT1LQ93083 61 aa3.24□□□□□ -1.89
SMC4-213ENST00000472282 MT1MQ8N339 61 aa3.22□□□□□ -1.89
SMC4-213ENST00000472282 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
SMC4-213ENST00000472282 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
SMC4-213ENST00000472282 AHNAK2Q8IVF2 5795 aa3.19□□□□□ -1.9
SMC4-213ENST00000472282 MT4P47944 62 aa3.17□□□□□ -1.9
SMC4-213ENST00000472282 KRTAP5-10Q6L8G5 202 aa3.1□□□□□ -1.91
SMC4-213ENST00000472282 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
SMC4-213ENST00000472282 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
SMC4-213ENST00000472282 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
SMC4-213ENST00000472282 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
SMC4-213ENST00000472282 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
SMC4-213ENST00000472282 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SMC4-213ENST00000472282 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
SMC4-213ENST00000472282 SYNE1Q8NF91 8797 aaKnown RBP2.88□□□□□ -1.95
SMC4-213ENST00000472282 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
SMC4-213ENST00000472282 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
SMC4-213ENST00000472282 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
SMC4-213ENST00000472282 MT1AP04731 61 aa2.76□□□□□ -1.97
SMC4-213ENST00000472282 KRTAP6-1Q3LI64 71 aa2.75□□□□□ -1.97
SMC4-213ENST00000472282 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
SMC4-213ENST00000472282 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
SMC4-213ENST00000472282 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SMC4-213ENST00000472282 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SMC4-213ENST00000472282 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
SMC4-213ENST00000472282 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
SMC4-213ENST00000472282 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
SMC4-213ENST00000472282 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SMC4-213ENST00000472282 INE1O15225 51 aa1.72□□□□□ -2.13
SMC4-213ENST00000472282 PRM1P04553 51 aa1.71□□□□□ -2.14
SMC4-213ENST00000472282 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
SMC4-213ENST00000472282 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 10.5 ms