RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 MUC3AQ02505 3323 aa-4.06□□□□□ -3.06
MDM2-216ENST00000471946 TFF3Q07654 80 aa-4.08□□□□□ -3.06
MDM2-216ENST00000471946 IQGAP1P46940 1657 aa-4.11□□□□□ -3.07
MDM2-216ENST00000471946 CEP250Q9BV73 2442 aa-4.11□□□□□ -3.07
MDM2-216ENST00000471946 WDFY4Q6ZS81 3184 aa-4.12□□□□□ -3.07
MDM2-216ENST00000471946 CLTCL1P53675 1640 aa-4.13□□□□□ -3.07
MDM2-216ENST00000471946 SCRIBQ14160 1630 aa-4.14□□□□□ -3.07
MDM2-216ENST00000471946 DCHS1Q96JQ0 3298 aa-4.15□□□□□ -3.07
MDM2-216ENST00000471946 A0A087WWC5 75 aa-4.16□□□□□ -3.08
MDM2-216ENST00000471946 PLNP26678 52 aa-4.17□□□□□ -3.08
MDM2-216ENST00000471946 DNAH14Q0VDD8 3507 aa-4.19□□□□□ -3.08
MDM2-216ENST00000471946 NRXN3Q9Y4C0 1643 aa-4.2□□□□□ -3.08
MDM2-216ENST00000471946 TTTY10Q9BZA0 68 aa-4.2□□□□□ -3.08
MDM2-216ENST00000471946 PRXQ9BXM0 1461 aa-4.25□□□□□ -3.09
MDM2-216ENST00000471946 SMIM2Q9BVW6 85 aa-4.28□□□□□ -3.09
MDM2-216ENST00000471946 NFAT5O94916 1531 aa-4.31□□□□□ -3.1
MDM2-216ENST00000471946 TRPM2O94759 1503 aa-4.31□□□□□ -3.1
MDM2-216ENST00000471946 USP34Q70CQ2 3546 aa-4.34□□□□□ -3.1
MDM2-216ENST00000471946 CFAP47Q6ZTR5 3102 aa-4.35□□□□□ -3.11
MDM2-216ENST00000471946 MKI67P46013 3256 aaKnown RBP-4.36□□□□□ -3.11
MDM2-216ENST00000471946 ADCY10Q96PN6 1610 aa-4.38□□□□□ -3.11
MDM2-216ENST00000471946 SMIM5Q71RC9 77 aa-4.38□□□□□ -3.11
MDM2-216ENST00000471946 ABCC8Q09428 1581 aa-4.4□□□□□ -3.11
MDM2-216ENST00000471946 DNAH12Q6ZR08 3092 aa-4.41□□□□□ -3.12
MDM2-216ENST00000471946 UNC80Q8N2C7 3258 aa-4.43□□□□□ -3.12
MDM2-216ENST00000471946 XIRP2A4UGR9 3374 aa-4.47□□□□□ -3.13
MDM2-216ENST00000471946 DEFB133Q30KQ1 61 aa-4.48□□□□□ -3.13
MDM2-216ENST00000471946 FANCD2Q9BXW9 1451 aa-4.49□□□□□ -3.13
MDM2-216ENST00000471946 RHPN1-AS1Q9BWJ2 59 aa-4.52□□□□□ -3.13
MDM2-216ENST00000471946 LOC400499M0QZD8 3231 aa-4.55□□□□□ -3.14
MDM2-216ENST00000471946 KRTAP19-2Q3LHN2 52 aa-4.58□□□□□ -3.14
MDM2-216ENST00000471946 NDUFA1O15239 70 aa-4.6□□□□□ -3.15
MDM2-216ENST00000471946 LINC01590Q5TEZ4 76 aa-4.6□□□□□ -3.15
MDM2-216ENST00000471946 TOMM7Q9P0U1 55 aa-4.6□□□□□ -3.15
MDM2-216ENST00000471946 CMC2Q9NRP2 79 aa-4.61□□□□□ -3.15
MDM2-216ENST00000471946 A0A096LNI7 61 aa-4.65□□□□□ -3.15
MDM2-216ENST00000471946 HTN1P15515 57 aa-4.65□□□□□ -3.15
MDM2-216ENST00000471946 CD52P31358 61 aa-4.65□□□□□ -3.15
MDM2-216ENST00000471946 ASPMQ8IZT6 3477 aa-4.71□□□□□ -3.16
MDM2-216ENST00000471946 BRCA2P51587 3418 aa-4.78□□□□□ -3.18
MDM2-216ENST00000471946 VCANP13611 3396 aa-4.82□□□□□ -3.18
MDM2-216ENST00000471946 CENPFP49454 3210 aa-4.87□□□□□ -3.19
MDM2-216ENST00000471946 ERICH3Q5RHP9 1530 aa-4.88□□□□□ -3.19
MDM2-216ENST00000471946 CDH23Q9H251 3354 aa-4.91□□□□□ -3.2
MDM2-216ENST00000471946 DEFB124Q8NES8 71 aa-4.94□□□□□ -3.2
MDM2-216ENST00000471946 SMIM31A0A1B0GVY4 71 aa-4.96□□□□□ -3.2
MDM2-216ENST00000471946 DUOX1Q9NRD9 1551 aa-4.97□□□□□ -3.21
MDM2-216ENST00000471946 RPL39P62891 51 aaKnown RBP-5.08□□□□□ -3.22
MDM2-216ENST00000471946 VPS13AQ96RL7 3174 aa-5.1□□□□□ -3.23
MDM2-216ENST00000471946 SAMD9LQ8IVG5 1584 aa-5.1□□□□□ -3.23
MDM2-216ENST00000471946 LINC01556Q5JQF7 62 aa-5.23□□□□□ -3.25
MDM2-216ENST00000471946 TOP2AP11388 1531 aaKnown RBP-5.24□□□□□ -3.25
MDM2-216ENST00000471946 RPL39LQ96EH5 51 aaKnown RBP-5.26□□□□□ -3.25
MDM2-216ENST00000471946 DEFB104AQ8WTQ1 72 aa-5.29□□□□□ -3.26
MDM2-216ENST00000471946 IQGAP2Q13576 1575 aa-5.32□□□□□ -3.26
MDM2-216ENST00000471946 MROH2BQ7Z745 1585 aa-5.33□□□□□ -3.26
MDM2-216ENST00000471946 SNRPGP15A8MWD9 76 aa-5.35□□□□□ -3.27
MDM2-216ENST00000471946 ATP7AQ04656 1500 aa-5.39□□□□□ -3.27
MDM2-216ENST00000471946 H3BUX3 64 aa-5.44□□□□□ -3.28
MDM2-216ENST00000471946 UTRNP46939 3433 aa-5.54□□□□□ -3.3
MDM2-216ENST00000471946 TOMM5Q8N4H5 51 aa-5.73□□□□□ -3.33
MDM2-216ENST00000471946 APELAP0DMC3 54 aa-5.74□□□□□ -3.33
MDM2-216ENST00000471946 K7EIM0 57 aa-5.78□□□□□ -3.33
MDM2-216ENST00000471946 A0A096LPF7 62 aa-5.8□□□□□ -3.34
MDM2-216ENST00000471946 ARHGAP5-AS1Q96IT6 56 aa-5.96□□□□□ -3.36
MDM2-216ENST00000471946 PRCDQ00LT1 54 aa-6.02□□□□□ -3.37
MDM2-216ENST00000471946 HTN3P15516 51 aa-6.09□□□□□ -3.38
MDM2-216ENST00000471946 TMEM167AQ8TBQ9 72 aa-6.1□□□□□ -3.39
MDM2-216ENST00000471946 GOLGB1Q14789 3259 aaKnown RBP-6.28□□□□□ -3.42
MDM2-216ENST00000471946 GCC2Q8IWJ2 1684 aa-6.33□□□□□ -3.42
MDM2-216ENST00000471946 SNRPGP62308 76 aaKnown RBP-6.45□□□□□ -3.44
MDM2-216ENST00000471946 Q9Y3F1 56 aa-6.46□□□□□ -3.44
MDM2-216ENST00000471946 RPL39P5Q59GN2 51 aa-6.54□□□□□ -3.46
MDM2-216ENST00000471946 DEFB108AA8MXU0 73 aa-6.61□□□□□ -3.47
MDM2-216ENST00000471946 H3BSH0 61 aa-6.61□□□□□ -3.47
MDM2-216ENST00000471946 COX14Q96I36 57 aa-6.84□□□□□ -3.5
MDM2-216ENST00000471946 DEFB108BQ8NET1 73 aa-7.09□□□□□ -3.54
MDM2-216ENST00000471946 STATHP02808 62 aa-7.81□□□□□ -3.66
Retrieved 78 of 20,778 RNA–protein pairs in 70.2 ms