RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
HDAC7-219ENST00000470668 KMT2DO14686 5537 aa4.62□□□□□ -1.67
HDAC7-219ENST00000470668 MT1LQ93083 61 aa4.6□□□□□ -1.67
HDAC7-219ENST00000470668 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
HDAC7-219ENST00000470668 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
HDAC7-219ENST00000470668 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
HDAC7-219ENST00000470668 MT1EP04732 61 aa4.52□□□□□ -1.69
HDAC7-219ENST00000470668 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
HDAC7-219ENST00000470668 SPRR2EP22531 72 aa4.5□□□□□ -1.69
HDAC7-219ENST00000470668 SPRR2BP35325 72 aa4.5□□□□□ -1.69
HDAC7-219ENST00000470668 SPRR2AP35326 72 aa4.5□□□□□ -1.69
HDAC7-219ENST00000470668 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
HDAC7-219ENST00000470668 KRTAP2-3P0C7H8 128 aa4.45□□□□□ -1.7
HDAC7-219ENST00000470668 KRTAP2-4Q9BYR9 128 aa4.45□□□□□ -1.7
HDAC7-219ENST00000470668 KRTAP2-1Q9BYU5 128 aa4.45□□□□□ -1.7
HDAC7-219ENST00000470668 KRTAP19-7Q3SYF9 63 aa4.43□□□□□ -1.7
HDAC7-219ENST00000470668 PRM1P04553 51 aa4.42□□□□□ -1.7
HDAC7-219ENST00000470668 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
HDAC7-219ENST00000470668 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
HDAC7-219ENST00000470668 KRTAP9-6A0A140TA67 174 aa4.38□□□□□ -1.71
HDAC7-219ENST00000470668 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
HDAC7-219ENST00000470668 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
HDAC7-219ENST00000470668 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
HDAC7-219ENST00000470668 SPRR2DP22532 72 aa4.32□□□□□ -1.72
HDAC7-219ENST00000470668 MT1MQ8N339 61 aa4.32□□□□□ -1.72
HDAC7-219ENST00000470668 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
HDAC7-219ENST00000470668 SSPOA2VEC9 5147 aa4.26□□□□□ -1.73
HDAC7-219ENST00000470668 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
HDAC7-219ENST00000470668 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
HDAC7-219ENST00000470668 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
HDAC7-219ENST00000470668 MT3P25713 68 aa3.99□□□□□ -1.77
HDAC7-219ENST00000470668 MT4P47944 62 aa3.97□□□□□ -1.77
HDAC7-219ENST00000470668 MT1AP04731 61 aa3.96□□□□□ -1.77
HDAC7-219ENST00000470668 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
HDAC7-219ENST00000470668 KRTAP6-2Q3LI66 62 aa3.93□□□□□ -1.78
HDAC7-219ENST00000470668 LCE5AQ5TCM9 118 aa3.89□□□□□ -1.79
HDAC7-219ENST00000470668 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
HDAC7-219ENST00000470668 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
HDAC7-219ENST00000470668 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
HDAC7-219ENST00000470668 LCE1AQ5T7P2 110 aa3.83□□□□□ -1.8
HDAC7-219ENST00000470668 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
HDAC7-219ENST00000470668 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
HDAC7-219ENST00000470668 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
HDAC7-219ENST00000470668 NEBP20929 6669 aa3.65□□□□□ -1.83
HDAC7-219ENST00000470668 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
HDAC7-219ENST00000470668 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
HDAC7-219ENST00000470668 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
HDAC7-219ENST00000470668 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
HDAC7-219ENST00000470668 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
HDAC7-219ENST00000470668 KRTAP4-6Q9BYQ5 205 aa3.34□□□□□ -1.88
HDAC7-219ENST00000470668 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
HDAC7-219ENST00000470668 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
HDAC7-219ENST00000470668 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
HDAC7-219ENST00000470668 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
HDAC7-219ENST00000470668 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
HDAC7-219ENST00000470668 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
HDAC7-219ENST00000470668 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
HDAC7-219ENST00000470668 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
HDAC7-219ENST00000470668 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
HDAC7-219ENST00000470668 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
HDAC7-219ENST00000470668 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
HDAC7-219ENST00000470668 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
HDAC7-219ENST00000470668 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
HDAC7-219ENST00000470668 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
HDAC7-219ENST00000470668 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
HDAC7-219ENST00000470668 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
HDAC7-219ENST00000470668 KRTAP5-8O75690 187 aa2.54□□□□□ -2
HDAC7-219ENST00000470668 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
HDAC7-219ENST00000470668 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
HDAC7-219ENST00000470668 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.03
HDAC7-219ENST00000470668 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
HDAC7-219ENST00000470668 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
HDAC7-219ENST00000470668 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
HDAC7-219ENST00000470668 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
HDAC7-219ENST00000470668 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
HDAC7-219ENST00000470668 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
HDAC7-219ENST00000470668 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
HDAC7-219ENST00000470668 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms