RNA–Protein interactions for RNA: ENST00000468598.5

SFPQ-205, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 2,835 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-205ENST00000468598 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
SFPQ-205ENST00000468598 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
SFPQ-205ENST00000468598 MT1BP07438 61 aa2.86□□□□□ -1.95
SFPQ-205ENST00000468598 KRTAP19-8Q3LI54 63 aa2.84□□□□□ -1.95
SFPQ-205ENST00000468598 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
SFPQ-205ENST00000468598 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
SFPQ-205ENST00000468598 KMT2DO14686 5537 aa2.78□□□□□ -1.96
SFPQ-205ENST00000468598 KRTAP12-3P60328 96 aa2.78□□□□□ -1.97
SFPQ-205ENST00000468598 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
SFPQ-205ENST00000468598 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
SFPQ-205ENST00000468598 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
SFPQ-205ENST00000468598 MT1XP80297 61 aa2.74□□□□□ -1.97
SFPQ-205ENST00000468598 KRTAP19-6Q3LI70 58 aa2.74□□□□□ -1.97
SFPQ-205ENST00000468598 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
SFPQ-205ENST00000468598 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.99
SFPQ-205ENST00000468598 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SFPQ-205ENST00000468598 MUC12Q9UKN1 5478 aa2.59□□□□□ -2
SFPQ-205ENST00000468598 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
SFPQ-205ENST00000468598 MDN1Q9NU22 5596 aa2.55□□□□□ -2
SFPQ-205ENST00000468598 KRTAP2-3P0C7H8 128 aa2.54□□□□□ -2
SFPQ-205ENST00000468598 KRTAP2-4Q9BYR9 128 aa2.54□□□□□ -2
SFPQ-205ENST00000468598 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
SFPQ-205ENST00000468598 LCE1FQ5T754 118 aa2.53□□□□□ -2
SFPQ-205ENST00000468598 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
SFPQ-205ENST00000468598 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
SFPQ-205ENST00000468598 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
SFPQ-205ENST00000468598 KRTAP19-7Q3SYF9 63 aa2.45□□□□□ -2.02
SFPQ-205ENST00000468598 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
SFPQ-205ENST00000468598 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
SFPQ-205ENST00000468598 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
SFPQ-205ENST00000468598 NEBP20929 6669 aa2.4□□□□□ -2.02
SFPQ-205ENST00000468598 MT1EP04732 61 aa2.4□□□□□ -2.03
SFPQ-205ENST00000468598 MT1LQ93083 61 aa2.39□□□□□ -2.03
SFPQ-205ENST00000468598 SPRR2EP22531 72 aa2.36□□□□□ -2.03
SFPQ-205ENST00000468598 SPRR2BP35325 72 aa2.36□□□□□ -2.03
SFPQ-205ENST00000468598 SPRR2AP35326 72 aa2.36□□□□□ -2.03
SFPQ-205ENST00000468598 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
SFPQ-205ENST00000468598 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
SFPQ-205ENST00000468598 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
SFPQ-205ENST00000468598 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
SFPQ-205ENST00000468598 MT3P25713 68 aa2.3□□□□□ -2.04
SFPQ-205ENST00000468598 KRTAP4-3Q9BYR4 195 aa2.3□□□□□ -2.04
SFPQ-205ENST00000468598 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
SFPQ-205ENST00000468598 SPRR2DP22532 72 aa2.27□□□□□ -2.05
SFPQ-205ENST00000468598 MT1GP13640 62 aa2.27□□□□□ -2.05
SFPQ-205ENST00000468598 MT1MQ8N339 61 aa2.27□□□□□ -2.05
SFPQ-205ENST00000468598 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
SFPQ-205ENST00000468598 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
SFPQ-205ENST00000468598 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SFPQ-205ENST00000468598 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
SFPQ-205ENST00000468598 MT1AP04731 61 aa2.15□□□□□ -2.07
SFPQ-205ENST00000468598 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
SFPQ-205ENST00000468598 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
SFPQ-205ENST00000468598 LCE3DQ9BYE3 92 aa2.05□□□□□ -2.08
SFPQ-205ENST00000468598 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
SFPQ-205ENST00000468598 MT4P47944 62 aa2.02□□□□□ -2.09
SFPQ-205ENST00000468598 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
SFPQ-205ENST00000468598 KRTAP5-4Q6L8H1 288 aa1.99□□□□□ -2.09
SFPQ-205ENST00000468598 PRM1P04553 51 aa1.99□□□□□ -2.09
SFPQ-205ENST00000468598 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
SFPQ-205ENST00000468598 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
SFPQ-205ENST00000468598 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
SFPQ-205ENST00000468598 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
SFPQ-205ENST00000468598 KRTAP4-4Q9BYR3 166 aa1.89□□□□□ -2.11
SFPQ-205ENST00000468598 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
SFPQ-205ENST00000468598 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SFPQ-205ENST00000468598 KRTAP5-2Q701N4 177 aa1.79□□□□□ -2.12
SFPQ-205ENST00000468598 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
SFPQ-205ENST00000468598 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
SFPQ-205ENST00000468598 KRTAP5-7Q6L8G8 165 aa1.61□□□□□ -2.15
SFPQ-205ENST00000468598 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
SFPQ-205ENST00000468598 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
SFPQ-205ENST00000468598 MUC19Q7Z5P9 8384 aa1.47□□□□□ -2.17
SFPQ-205ENST00000468598 LCE1CQ5T751 118 aa1.45□□□□□ -2.18
SFPQ-205ENST00000468598 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SFPQ-205ENST00000468598 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
SFPQ-205ENST00000468598 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
SFPQ-205ENST00000468598 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 55.8 ms