RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 MT1XP80297 61 aa2.33□□□□□ -2.04
SHQ1-205ENST00000468371 KRTAP4-8A0A0G2JLE6 195 aa2.28□□□□□ -2.04
SHQ1-205ENST00000468371 KRTAP2-3P0C7H8 128 aa2.28□□□□□ -2.04
SHQ1-205ENST00000468371 KRTAP10-7P60409 375 aaPredicted RBP2.28□□□□□ -2.04
SHQ1-205ENST00000468371 KRTAP4-8Q9BYQ9 185 aa2.28□□□□□ -2.04
SHQ1-205ENST00000468371 KRTAP2-4Q9BYR9 128 aa2.28□□□□□ -2.04
SHQ1-205ENST00000468371 KMT2DO14686 5537 aa2.26□□□□□ -2.05
SHQ1-205ENST00000468371 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
SHQ1-205ENST00000468371 NEBP20929 6669 aa2.23□□□□□ -2.05
SHQ1-205ENST00000468371 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
SHQ1-205ENST00000468371 KRTAP4-6Q9BYQ5 205 aa2.22□□□□□ -2.05
SHQ1-205ENST00000468371 LCE3BQ5TA77 95 aa2.21□□□□□ -2.06
SHQ1-205ENST00000468371 KRTAP2-2Q9BYT5 123 aa2.2□□□□□ -2.06
SHQ1-205ENST00000468371 KRTAP2-1Q9BYU5 128 aa2.2□□□□□ -2.06
SHQ1-205ENST00000468371 KRTAP5-9P26371 169 aa2.19□□□□□ -2.06
SHQ1-205ENST00000468371 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
SHQ1-205ENST00000468371 LCE1AQ5T7P2 110 aa2.17□□□□□ -2.06
SHQ1-205ENST00000468371 MT1GP13640 62 aa2.15□□□□□ -2.07
SHQ1-205ENST00000468371 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
SHQ1-205ENST00000468371 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
SHQ1-205ENST00000468371 KRTAP19-3Q7Z4W3 81 aa2.14□□□□□ -2.07
SHQ1-205ENST00000468371 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
SHQ1-205ENST00000468371 MT1EP04732 61 aa2.1□□□□□ -2.07
SHQ1-205ENST00000468371 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
SHQ1-205ENST00000468371 MT4P47944 62 aa2.07□□□□□ -2.08
SHQ1-205ENST00000468371 KRTAP4-7Q9BYR0 210 aa2.06□□□□□ -2.08
SHQ1-205ENST00000468371 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SHQ1-205ENST00000468371 KRTAP19-7Q3SYF9 63 aa2.04□□□□□ -2.08
SHQ1-205ENST00000468371 KRTAP4-9Q9BYQ8 210 aa2.03□□□□□ -2.08
SHQ1-205ENST00000468371 MT1LQ93083 61 aa2.03□□□□□ -2.08
SHQ1-205ENST00000468371 MT1MQ8N339 61 aa2.02□□□□□ -2.09
SHQ1-205ENST00000468371 KRTAP19-4Q3LI73 84 aa2.02□□□□□ -2.09
SHQ1-205ENST00000468371 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
SHQ1-205ENST00000468371 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
SHQ1-205ENST00000468371 LCE4AQ5TA78 99 aa1.98□□□□□ -2.09
SHQ1-205ENST00000468371 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
SHQ1-205ENST00000468371 SYNE1Q8NF91 8797 aaKnown RBP1.97□□□□□ -2.09
SHQ1-205ENST00000468371 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
SHQ1-205ENST00000468371 KRTAP9-6A8MVA2 160 aa1.94□□□□□ -2.1
SHQ1-205ENST00000468371 LCE1DQ5T752 114 aa1.9□□□□□ -2.1
SHQ1-205ENST00000468371 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
SHQ1-205ENST00000468371 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
SHQ1-205ENST00000468371 KRTAP9-9Q9BYP9 154 aa1.78□□□□□ -2.12
SHQ1-205ENST00000468371 KRTAP9-4Q9BYQ2 154 aa1.78□□□□□ -2.12
SHQ1-205ENST00000468371 MT1AP04731 61 aa1.77□□□□□ -2.13
SHQ1-205ENST00000468371 MT3P25713 68 aa1.75□□□□□ -2.13
SHQ1-205ENST00000468371 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
SHQ1-205ENST00000468371 KRTAP20-2Q3LI61 65 aa1.75□□□□□ -2.13
SHQ1-205ENST00000468371 PRM1P04553 51 aa1.74□□□□□ -2.13
SHQ1-205ENST00000468371 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
SHQ1-205ENST00000468371 KRTAP5-4Q6L8H1 288 aa1.72□□□□□ -2.13
SHQ1-205ENST00000468371 KRTAP6-1Q3LI64 71 aa1.71□□□□□ -2.14
SHQ1-205ENST00000468371 KRTAP5-3Q6L8H2 238 aa1.71□□□□□ -2.14
SHQ1-205ENST00000468371 KRTAP4-2Q9BYR5 136 aa1.69□□□□□ -2.14
SHQ1-205ENST00000468371 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
SHQ1-205ENST00000468371 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
SHQ1-205ENST00000468371 KRTAP4-11Q9BYQ6 195 aa1.63□□□□□ -2.15
SHQ1-205ENST00000468371 KRTAP5-5Q701N2 237 aaPredicted RBP1.62□□□□□ -2.15
SHQ1-205ENST00000468371 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
SHQ1-205ENST00000468371 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
SHQ1-205ENST00000468371 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
SHQ1-205ENST00000468371 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
SHQ1-205ENST00000468371 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SHQ1-205ENST00000468371 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
SHQ1-205ENST00000468371 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
SHQ1-205ENST00000468371 LCE1EQ5T753 118 aa1.42□□□□□ -2.18
SHQ1-205ENST00000468371 MUC5BQ9HC84 5762 aaPredicted RBP1.4□□□□□ -2.19
SHQ1-205ENST00000468371 MUC19Q7Z5P9 8384 aa1.4□□□□□ -2.19
SHQ1-205ENST00000468371 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
SHQ1-205ENST00000468371 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
SHQ1-205ENST00000468371 KRTAP5-1Q6L8H4 278 aa1.33□□□□□ -2.2
SHQ1-205ENST00000468371 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.29□□□□□ -2.2
SHQ1-205ENST00000468371 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
SHQ1-205ENST00000468371 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
SHQ1-205ENST00000468371 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
SHQ1-205ENST00000468371 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
SHQ1-205ENST00000468371 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
SHQ1-205ENST00000468371 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 101.4 ms