RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FAM208AQ9UK61 1670 aaKnown RBP-1.1□□□□□ -2.58
SMC4-208ENST00000467468 DNAH12Q6ZR08 3092 aa-1.1□□□□□ -2.59
SMC4-208ENST00000467468 DNAH14Q0VDD8 3507 aa-1.1□□□□□ -2.59
SMC4-208ENST00000467468 DEFB104AQ8WTQ1 72 aa-1.11□□□□□ -2.59
SMC4-208ENST00000467468 KIF21BO75037 1637 aa-1.11□□□□□ -2.59
SMC4-208ENST00000467468 SPART-AS1P0CW21 52 aa-1.12□□□□□ -2.59
SMC4-208ENST00000467468 KRTAP19-2Q3LHN2 52 aa-1.12□□□□□ -2.59
SMC4-208ENST00000467468 WFDC10BQ8IUB3 73 aa-1.12□□□□□ -2.59
SMC4-208ENST00000467468 AGLP35573 1532 aa-1.13□□□□□ -2.59
SMC4-208ENST00000467468 PCNTO95613 3336 aa-1.14□□□□□ -2.59
SMC4-208ENST00000467468 VPS13CQ709C8 3753 aa-1.14□□□□□ -2.59
SMC4-208ENST00000467468 ERICH3Q5RHP9 1530 aa-1.15□□□□□ -2.59
SMC4-208ENST00000467468 LEAP2Q969E1 77 aa-1.16□□□□□ -2.6
SMC4-208ENST00000467468 PREX2Q70Z35 1606 aa-1.16□□□□□ -2.6
SMC4-208ENST00000467468 CDH23Q9H251 3354 aa-1.17□□□□□ -2.6
SMC4-208ENST00000467468 CENPFP49454 3210 aa-1.17□□□□□ -2.6
SMC4-208ENST00000467468 LMO7Q8WWI1 1683 aa-1.18□□□□□ -2.6
SMC4-208ENST00000467468 PLNP26678 52 aa-1.2□□□□□ -2.6
SMC4-208ENST00000467468 CD52P31358 61 aa-1.22□□□□□ -2.6
SMC4-208ENST00000467468 ADCY10Q96PN6 1610 aa-1.22□□□□□ -2.61
SMC4-208ENST00000467468 BRCA2P51587 3418 aa-1.23□□□□□ -2.61
SMC4-208ENST00000467468 SYCP2Q9BX26 1530 aa-1.25□□□□□ -2.61
SMC4-208ENST00000467468 ABCA5Q8WWZ7 1642 aa-1.25□□□□□ -2.61
SMC4-208ENST00000467468 NRXN3Q9Y4C0 1643 aa-1.25□□□□□ -2.61
SMC4-208ENST00000467468 DEFB131AP59861 70 aa-1.26□□□□□ -2.61
SMC4-208ENST00000467468 MROH2AA6NES4 1674 aa-1.28□□□□□ -2.61
SMC4-208ENST00000467468 TFF3Q07654 80 aa-1.28□□□□□ -2.61
SMC4-208ENST00000467468 VPS13AQ96RL7 3174 aa-1.29□□□□□ -2.62
SMC4-208ENST00000467468 ASPMQ8IZT6 3477 aa-1.29□□□□□ -2.62
SMC4-208ENST00000467468 DEFB133Q30KQ1 61 aa-1.3□□□□□ -2.62
SMC4-208ENST00000467468 CMC2Q9NRP2 79 aa-1.31□□□□□ -2.62
SMC4-208ENST00000467468 ABCC8Q09428 1581 aa-1.31□□□□□ -2.62
SMC4-208ENST00000467468 UTRNP46939 3433 aa-1.31□□□□□ -2.62
SMC4-208ENST00000467468 SMIM2Q9BVW6 85 aa-1.34□□□□□ -2.62
SMC4-208ENST00000467468 HTN1P15515 57 aa-1.35□□□□□ -2.63
SMC4-208ENST00000467468 GOLGB1Q14789 3259 aaKnown RBP-1.36□□□□□ -2.63
SMC4-208ENST00000467468 XIRP2A4UGR9 3374 aa-1.36□□□□□ -2.63
SMC4-208ENST00000467468 FANCD2Q9BXW9 1451 aa-1.37□□□□□ -2.63
SMC4-208ENST00000467468 POLR2KP53803 58 aaKnown RBP-1.38□□□□□ -2.63
SMC4-208ENST00000467468 IQGAP1P46940 1657 aa-1.39□□□□□ -2.63
SMC4-208ENST00000467468 DDX60Q8IY21 1712 aaKnown RBP-1.4□□□□□ -2.63
SMC4-208ENST00000467468 RHPN1-AS1Q9BWJ2 59 aa-1.41□□□□□ -2.64
SMC4-208ENST00000467468 NFAT5O94916 1531 aa-1.43□□□□□ -2.64
SMC4-208ENST00000467468 LINC01556Q5JQF7 62 aa-1.43□□□□□ -2.64
SMC4-208ENST00000467468 TRPM2O94759 1503 aa-1.45□□□□□ -2.64
SMC4-208ENST00000467468 A0A096LNI7 61 aa-1.45□□□□□ -2.64
SMC4-208ENST00000467468 CLTCL1P53675 1640 aa-1.51□□□□□ -2.65
SMC4-208ENST00000467468 DEFB124Q8NES8 71 aa-1.52□□□□□ -2.65
SMC4-208ENST00000467468 SNRPGP15A8MWD9 76 aa-1.55□□□□□ -2.66
SMC4-208ENST00000467468 NDUFA1O15239 70 aa-1.55□□□□□ -2.66
SMC4-208ENST00000467468 LINC01590Q5TEZ4 76 aa-1.55□□□□□ -2.66
SMC4-208ENST00000467468 HTN3P15516 51 aa-1.56□□□□□ -2.66
SMC4-208ENST00000467468 APELAP0DMC3 54 aa-1.59□□□□□ -2.66
SMC4-208ENST00000467468 H3BSH0 61 aa-1.6□□□□□ -2.67
SMC4-208ENST00000467468 TOMM7Q9P0U1 55 aa-1.63□□□□□ -2.67
SMC4-208ENST00000467468 A0A096LPF7 62 aa-1.64□□□□□ -2.67
SMC4-208ENST00000467468 H3BUX3 64 aa-1.67□□□□□ -2.68
SMC4-208ENST00000467468 Q9Y3F1 56 aa-1.7□□□□□ -2.68
SMC4-208ENST00000467468 STATHP02808 62 aa-1.73□□□□□ -2.69
SMC4-208ENST00000467468 COX14Q96I36 57 aa-1.74□□□□□ -2.69
SMC4-208ENST00000467468 ATP7AQ04656 1500 aa-1.75□□□□□ -2.69
SMC4-208ENST00000467468 TOP2AP11388 1531 aaKnown RBP-1.8□□□□□ -2.7
SMC4-208ENST00000467468 TMEM167AQ8TBQ9 72 aa-1.8□□□□□ -2.7
SMC4-208ENST00000467468 IQGAP2Q13576 1575 aa-1.81□□□□□ -2.7
SMC4-208ENST00000467468 PRCDQ00LT1 54 aa-1.81□□□□□ -2.7
SMC4-208ENST00000467468 DUOX1Q9NRD9 1551 aa-1.83□□□□□ -2.7
SMC4-208ENST00000467468 MROH2BQ7Z745 1585 aa-1.84□□□□□ -2.7
SMC4-208ENST00000467468 DEFB108BQ8NET1 73 aa-1.84□□□□□ -2.7
SMC4-208ENST00000467468 DEFB108AA8MXU0 73 aa-1.88□□□□□ -2.71
SMC4-208ENST00000467468 TOMM5Q8N4H5 51 aa-1.88□□□□□ -2.71
SMC4-208ENST00000467468 RPL39P62891 51 aaKnown RBP-1.9□□□□□ -2.71
SMC4-208ENST00000467468 K7EIM0 57 aa-1.92□□□□□ -2.72
SMC4-208ENST00000467468 RPL39LQ96EH5 51 aaKnown RBP-1.93□□□□□ -2.72
SMC4-208ENST00000467468 SAMD9LQ8IVG5 1584 aa-1.93□□□□□ -2.72
SMC4-208ENST00000467468 ARHGAP5-AS1Q96IT6 56 aa-1.94□□□□□ -2.72
SMC4-208ENST00000467468 RPL39P5Q59GN2 51 aa-2.07□□□□□ -2.74
SMC4-208ENST00000467468 SNRPGP62308 76 aaKnown RBP-2.08□□□□□ -2.74
SMC4-208ENST00000467468 GCC2Q8IWJ2 1684 aa-2.11□□□□□ -2.75
Retrieved 78 of 20,778 RNA–protein pairs in 11.8 ms