RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
CHD1L-205ENST00000467213 MT1GP13640 62 aa4.91□□□□□ -1.62
CHD1L-205ENST00000467213 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CHD1L-205ENST00000467213 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CHD1L-205ENST00000467213 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
CHD1L-205ENST00000467213 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
CHD1L-205ENST00000467213 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
CHD1L-205ENST00000467213 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
CHD1L-205ENST00000467213 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
CHD1L-205ENST00000467213 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
CHD1L-205ENST00000467213 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CHD1L-205ENST00000467213 MT1AP04731 61 aa4.75□□□□□ -1.65
CHD1L-205ENST00000467213 LCE5AQ5TCM9 118 aa4.67□□□□□ -1.66
CHD1L-205ENST00000467213 SYNE2Q8WXH0 6885 aaKnown RBP4.65□□□□□ -1.67
CHD1L-205ENST00000467213 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
CHD1L-205ENST00000467213 MACF1Q9UPN3 7388 aaKnown RBP4.6□□□□□ -1.67
CHD1L-205ENST00000467213 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
CHD1L-205ENST00000467213 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
CHD1L-205ENST00000467213 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
CHD1L-205ENST00000467213 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
CHD1L-205ENST00000467213 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
CHD1L-205ENST00000467213 MDN1Q9NU22 5596 aa4.46□□□□□ -1.7
CHD1L-205ENST00000467213 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
CHD1L-205ENST00000467213 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CHD1L-205ENST00000467213 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
CHD1L-205ENST00000467213 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CHD1L-205ENST00000467213 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
CHD1L-205ENST00000467213 PRM1P04553 51 aa4.32□□□□□ -1.72
CHD1L-205ENST00000467213 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
CHD1L-205ENST00000467213 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CHD1L-205ENST00000467213 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
CHD1L-205ENST00000467213 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
CHD1L-205ENST00000467213 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
CHD1L-205ENST00000467213 KRTAP9-6A0A140TA67 174 aa4.06□□□□□ -1.76
CHD1L-205ENST00000467213 MT3P25713 68 aa4.01□□□□□ -1.77
CHD1L-205ENST00000467213 SPRR2AP35326 72 aa3.99□□□□□ -1.77
CHD1L-205ENST00000467213 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
CHD1L-205ENST00000467213 KRTAP2-2Q9BYT5 123 aa3.93□□□□□ -1.78
CHD1L-205ENST00000467213 SPRR2EP22531 72 aa3.92□□□□□ -1.78
CHD1L-205ENST00000467213 SPRR2BP35325 72 aa3.92□□□□□ -1.78
CHD1L-205ENST00000467213 SPRR2DP22532 72 aa3.75□□□□□ -1.81
CHD1L-205ENST00000467213 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
CHD1L-205ENST00000467213 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
CHD1L-205ENST00000467213 NEBP20929 6669 aa3.56□□□□□ -1.84
CHD1L-205ENST00000467213 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CHD1L-205ENST00000467213 MT4P47944 62 aa3.45□□□□□ -1.86
CHD1L-205ENST00000467213 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
CHD1L-205ENST00000467213 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
CHD1L-205ENST00000467213 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
CHD1L-205ENST00000467213 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
CHD1L-205ENST00000467213 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
CHD1L-205ENST00000467213 MUC5ACP98088 5654 aa3.29□□□□□ -1.88
CHD1L-205ENST00000467213 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.89
CHD1L-205ENST00000467213 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
CHD1L-205ENST00000467213 KRTAP5-3Q6L8H2 238 aa3.25□□□□□ -1.89
CHD1L-205ENST00000467213 LCE1DQ5T752 114 aa3.17□□□□□ -1.9
CHD1L-205ENST00000467213 KRTAP4-11Q9BYQ6 195 aa3.17□□□□□ -1.9
CHD1L-205ENST00000467213 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
CHD1L-205ENST00000467213 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
CHD1L-205ENST00000467213 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
CHD1L-205ENST00000467213 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
CHD1L-205ENST00000467213 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.01□□□□□ -1.93
CHD1L-205ENST00000467213 KRTAP21-2Q3LI59 83 aa2.91□□□□□ -1.94
CHD1L-205ENST00000467213 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CHD1L-205ENST00000467213 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CHD1L-205ENST00000467213 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
CHD1L-205ENST00000467213 KRTAP5-7Q6L8G8 165 aa2.76□□□□□ -1.97
CHD1L-205ENST00000467213 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
CHD1L-205ENST00000467213 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CHD1L-205ENST00000467213 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
CHD1L-205ENST00000467213 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
CHD1L-205ENST00000467213 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
CHD1L-205ENST00000467213 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
CHD1L-205ENST00000467213 LCE1FQ5T754 118 aa2.57□□□□□ -2
CHD1L-205ENST00000467213 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
CHD1L-205ENST00000467213 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
CHD1L-205ENST00000467213 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
CHD1L-205ENST00000467213 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 91.1 ms