RNA–Protein interactions for RNA: ENST00000466213.5

SFPQ-203, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 1 (best)

Gene SFPQ, Length 1,431 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-203ENST00000466213 FAT4Q6V0I7 4981 aa2.82□□□□□ -1.96
SFPQ-203ENST00000466213 KRTAP10-10P60014 251 aa2.82□□□□□ -1.96
SFPQ-203ENST00000466213 CRCT1Q9UGL9 99 aa2.81□□□□□ -1.96
SFPQ-203ENST00000466213 FLGP20930 4061 aaPredicted RBP2.79□□□□□ -1.96
SFPQ-203ENST00000466213 H0YAA0 97 aa2.78□□□□□ -1.96
SFPQ-203ENST00000466213 CRIPTQ9P021 101 aa2.76□□□□□ -1.97
SFPQ-203ENST00000466213 MT2AP02795 61 aa2.76□□□□□ -1.97
SFPQ-203ENST00000466213 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
SFPQ-203ENST00000466213 MT1FP04733 61 aa2.72□□□□□ -1.97
SFPQ-203ENST00000466213 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
SFPQ-203ENST00000466213 M0QZ58 72 aa2.7□□□□□ -1.98
SFPQ-203ENST00000466213 SPRR2GQ9BYE4 73 aa2.65□□□□□ -1.99
SFPQ-203ENST00000466213 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
SFPQ-203ENST00000466213 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
SFPQ-203ENST00000466213 A0A0D9SG42 100 aa2.61□□□□□ -1.99
SFPQ-203ENST00000466213 KRTAP4-3Q9BYR4 195 aa2.61□□□□□ -1.99
SFPQ-203ENST00000466213 KRTAP19-8Q3LI54 63 aa2.59□□□□□ -2
SFPQ-203ENST00000466213 KRTAP12-1P59990 96 aa2.57□□□□□ -2
SFPQ-203ENST00000466213 MT1BP07438 61 aa2.53□□□□□ -2
SFPQ-203ENST00000466213 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
SFPQ-203ENST00000466213 USH2AO75445 5202 aa2.5□□□□□ -2.01
SFPQ-203ENST00000466213 C10orf95Q9H7T3 257 aa2.5□□□□□ -2.01
SFPQ-203ENST00000466213 KRTAP6-3Q3LI67 103 aa2.45□□□□□ -2.02
SFPQ-203ENST00000466213 MT1XP80297 61 aa2.42□□□□□ -2.02
SFPQ-203ENST00000466213 TNP1P09430 55 aa2.42□□□□□ -2.02
SFPQ-203ENST00000466213 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
SFPQ-203ENST00000466213 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
SFPQ-203ENST00000466213 KRTAP20-1Q3LI63 56 aa2.41□□□□□ -2.02
SFPQ-203ENST00000466213 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
SFPQ-203ENST00000466213 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
SFPQ-203ENST00000466213 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
SFPQ-203ENST00000466213 NEBP20929 6669 aa2.33□□□□□ -2.04
SFPQ-203ENST00000466213 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
SFPQ-203ENST00000466213 SYNE2Q8WXH0 6885 aaKnown RBP2.3□□□□□ -2.04
SFPQ-203ENST00000466213 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
SFPQ-203ENST00000466213 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
SFPQ-203ENST00000466213 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
SFPQ-203ENST00000466213 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
SFPQ-203ENST00000466213 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
SFPQ-203ENST00000466213 KRTAP19-5Q3LI72 72 aa2.2□□□□□ -2.06
SFPQ-203ENST00000466213 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
SFPQ-203ENST00000466213 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
SFPQ-203ENST00000466213 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
SFPQ-203ENST00000466213 SPRR2EP22531 72 aa2.18□□□□□ -2.06
SFPQ-203ENST00000466213 SPRR2BP35325 72 aa2.18□□□□□ -2.06
SFPQ-203ENST00000466213 SPRR2AP35326 72 aa2.18□□□□□ -2.06
SFPQ-203ENST00000466213 KMT2DO14686 5537 aa2.17□□□□□ -2.06
SFPQ-203ENST00000466213 MT1EP04732 61 aa2.16□□□□□ -2.06
SFPQ-203ENST00000466213 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
SFPQ-203ENST00000466213 MT1GP13640 62 aa2.11□□□□□ -2.07
SFPQ-203ENST00000466213 SPRR2DP22532 72 aa2.11□□□□□ -2.07
SFPQ-203ENST00000466213 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
SFPQ-203ENST00000466213 MT1LQ93083 61 aa2.09□□□□□ -2.07
SFPQ-203ENST00000466213 MDN1Q9NU22 5596 aa2.09□□□□□ -2.08
SFPQ-203ENST00000466213 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
SFPQ-203ENST00000466213 MUC12Q9UKN1 5478 aa2.07□□□□□ -2.08
SFPQ-203ENST00000466213 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
SFPQ-203ENST00000466213 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
SFPQ-203ENST00000466213 MT1MQ8N339 61 aa2.04□□□□□ -2.08
SFPQ-203ENST00000466213 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
SFPQ-203ENST00000466213 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SFPQ-203ENST00000466213 DSTQ03001 7570 aaKnown RBP1.89□□□□□ -2.11
SFPQ-203ENST00000466213 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
SFPQ-203ENST00000466213 MT4P47944 62 aa1.83□□□□□ -2.12
SFPQ-203ENST00000466213 MT1AP04731 61 aa1.8□□□□□ -2.12
SFPQ-203ENST00000466213 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
SFPQ-203ENST00000466213 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
SFPQ-203ENST00000466213 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
SFPQ-203ENST00000466213 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
SFPQ-203ENST00000466213 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
SFPQ-203ENST00000466213 SYNE1Q8NF91 8797 aaKnown RBP1.66□□□□□ -2.14
SFPQ-203ENST00000466213 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
SFPQ-203ENST00000466213 MUC5ACP98088 5654 aa1.63□□□□□ -2.15
SFPQ-203ENST00000466213 PRM1P04553 51 aa1.48□□□□□ -2.17
SFPQ-203ENST00000466213 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
SFPQ-203ENST00000466213 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SFPQ-203ENST00000466213 PHGR1C9JFL3 82 aa1.15□□□□□ -2.22
SFPQ-203ENST00000466213 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 142.9 ms