RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
SMC4-206ENST00000465903 MT1LQ93083 61 aa9.25□□□□□ -0.93
SMC4-206ENST00000465903 K7ERS5 55 aa9.24□□□□□ -0.93
SMC4-206ENST00000465903 A6NED7 52 aa9.17□□□□□ -0.94
SMC4-206ENST00000465903 LOC100996750A0A140TA64 210 aa9.15□□□□□ -0.94
SMC4-206ENST00000465903 PP632Q6XCG6 107 aa9.15□□□□□ -0.94
SMC4-206ENST00000465903 MT1MQ8N339 61 aa9.15□□□□□ -0.94
SMC4-206ENST00000465903 KRTAP4-6Q9BYQ5 205 aa9.15□□□□□ -0.94
SMC4-206ENST00000465903 DSTQ03001 7570 aaKnown RBP9.14□□□□□ -0.95
SMC4-206ENST00000465903 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
SMC4-206ENST00000465903 KRTAP12-3P60328 96 aa9.08□□□□□ -0.96
SMC4-206ENST00000465903 KRTAP4-3Q9BYR4 195 aa8.95□□□□□ -0.98
SMC4-206ENST00000465903 KRTAP4-7Q9BYR0 210 aa8.85□□□□□ -0.99
SMC4-206ENST00000465903 KRTAP23-1A1A580 65 aa8.84□□□□□ -0.99
SMC4-206ENST00000465903 CDC42SE1Q9NRR8 79 aa8.83□□□□□ -1
SMC4-206ENST00000465903 KRTAP4-9Q9BYQ8 210 aa8.77□□□□□ -1.01
SMC4-206ENST00000465903 ROMO1P60602 79 aa8.73□□□□□ -1.01
SMC4-206ENST00000465903 LCE4AQ5TA78 99 aa8.65□□□□□ -1.02
SMC4-206ENST00000465903 LCE1DQ5T752 114 aa8.59□□□□□ -1.03
SMC4-206ENST00000465903 KRTAP15-1Q3LI76 137 aa8.58□□□□□ -1.04
SMC4-206ENST00000465903 KRTAP5-4Q6L8H1 288 aa8.58□□□□□ -1.04
SMC4-206ENST00000465903 KRTAP19-4Q3LI73 84 aa8.57□□□□□ -1.04
SMC4-206ENST00000465903 MT4P47944 62 aa8.52□□□□□ -1.05
SMC4-206ENST00000465903 LCE3CQ5T5A8 94 aa8.4□□□□□ -1.06
SMC4-206ENST00000465903 KRTAP5-5Q701N2 237 aaPredicted RBP8.39□□□□□ -1.07
SMC4-206ENST00000465903 HMCN1Q96RW7 5635 aa8.37□□□□□ -1.07
SMC4-206ENST00000465903 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
SMC4-206ENST00000465903 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
SMC4-206ENST00000465903 GPR98Q8WXG9 6306 aa8.11□□□□□ -1.11
SMC4-206ENST00000465903 SYNE1Q8NF91 8797 aaKnown RBP8.1□□□□□ -1.11
SMC4-206ENST00000465903 KRTAP20-2Q3LI61 65 aa8.06□□□□□ -1.12
SMC4-206ENST00000465903 SPRR5A0A1B0GTR4 108 aa8.04□□□□□ -1.12
SMC4-206ENST00000465903 KRTAP12-4P60329 112 aa8.02□□□□□ -1.13
SMC4-206ENST00000465903 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
SMC4-206ENST00000465903 AHNAK2Q8IVF2 5795 aa7.96□□□□□ -1.13
SMC4-206ENST00000465903 MT1AP04731 61 aa7.87□□□□□ -1.15
SMC4-206ENST00000465903 KRTAP9-9Q9BYP9 154 aa7.87□□□□□ -1.15
SMC4-206ENST00000465903 KRTAP9-4Q9BYQ2 154 aa7.87□□□□□ -1.15
SMC4-206ENST00000465903 KRTAP5-10Q6L8G5 202 aa7.85□□□□□ -1.15
SMC4-206ENST00000465903 KRTAP5-3Q6L8H2 238 aa7.85□□□□□ -1.15
SMC4-206ENST00000465903 KRTAP6-1Q3LI64 71 aa7.83□□□□□ -1.16
SMC4-206ENST00000465903 PMAIP1Q13794 54 aa7.67□□□□□ -1.18
SMC4-206ENST00000465903 KRTAP5-2Q701N4 177 aa7.57□□□□□ -1.2
SMC4-206ENST00000465903 KRTAP5-7Q6L8G8 165 aa7.49□□□□□ -1.21
SMC4-206ENST00000465903 H3BS24 57 aa7.44□□□□□ -1.22
SMC4-206ENST00000465903 KRTAP6-2Q3LI66 62 aa7.4□□□□□ -1.22
SMC4-206ENST00000465903 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
SMC4-206ENST00000465903 KRTAP4-11Q9BYQ6 195 aa7.28□□□□□ -1.24
SMC4-206ENST00000465903 PRO0628Q9UI54 55 aa7.28□□□□□ -1.24
SMC4-206ENST00000465903 MT3P25713 68 aa7.16□□□□□ -1.26
SMC4-206ENST00000465903 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
SMC4-206ENST00000465903 KRTAP5-8O75690 187 aa7.06□□□□□ -1.28
SMC4-206ENST00000465903 OBSCNQ5VST9 7968 aa7.01□□□□□ -1.29
SMC4-206ENST00000465903 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
SMC4-206ENST00000465903 KRTAP5-1Q6L8H4 278 aa6.74□□□□□ -1.33
SMC4-206ENST00000465903 SVIPQ8NHG7 77 aa6.57□□□□□ -1.36
SMC4-206ENST00000465903 MUC5ACP98088 5654 aa6.54□□□□□ -1.36
SMC4-206ENST00000465903 LCE1EQ5T753 118 aa6.52□□□□□ -1.37
SMC4-206ENST00000465903 MUC5BQ9HC84 5762 aaPredicted RBP6.48□□□□□ -1.37
SMC4-206ENST00000465903 AHNAKQ09666 5890 aaKnown RBP6.39□□□□□ -1.39
SMC4-206ENST00000465903 LCE1BQ5T7P3 118 aa6.11□□□□□ -1.43
SMC4-206ENST00000465903 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
SMC4-206ENST00000465903 LCE3DQ9BYE3 92 aa6.1□□□□□ -1.43
SMC4-206ENST00000465903 LCE1CQ5T751 118 aa6.06□□□□□ -1.44
SMC4-206ENST00000465903 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
SMC4-206ENST00000465903 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.56□□□□□ -1.52
SMC4-206ENST00000465903 KRTAP5-11Q6L8G4 156 aa5.46□□□□□ -1.54
SMC4-206ENST00000465903 LCE1FQ5T754 118 aa5.24□□□□□ -1.57
SMC4-206ENST00000465903 KRTAP21-2Q3LI59 83 aa5.16□□□□□ -1.58
SMC4-206ENST00000465903 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
SMC4-206ENST00000465903 PHGR1C9JFL3 82 aa4.71□□□□□ -1.66
SMC4-206ENST00000465903 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
SMC4-206ENST00000465903 PRM1P04553 51 aa4.5□□□□□ -1.69
SMC4-206ENST00000465903 MUC19Q7Z5P9 8384 aa4.3□□□□□ -1.72
SMC4-206ENST00000465903 INE1O15225 51 aa4.13□□□□□ -1.75
SMC4-206ENST00000465903 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
SMC4-206ENST00000465903 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
SMC4-206ENST00000465903 MUC16Q8WXI7 14507 aa3.08□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms