RNA–Protein interactions for RNA: ENST00000465703.5

SKIV2L-204, Transcript of Ski2 like RNA helicase, humanhuman

TSL 1 (best)

Gene SKIV2L, Length 4,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-204ENST00000465703 PRM1P04553 51 aa4.6□□□□□ -1.67
SKIV2L-204ENST00000465703 SPRR2DP22532 72 aa4.6□□□□□ -1.67
SKIV2L-204ENST00000465703 EPPK1P58107 5090 aaKnown RBP4.55□□□□□ -1.68
SKIV2L-204ENST00000465703 MT3P25713 68 aa4.54□□□□□ -1.68
SKIV2L-204ENST00000465703 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.69
SKIV2L-204ENST00000465703 ABCA13Q86UQ4 5058 aa4.52□□□□□ -1.69
SKIV2L-204ENST00000465703 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
SKIV2L-204ENST00000465703 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
SKIV2L-204ENST00000465703 MT1AP04731 61 aa4.44□□□□□ -1.7
SKIV2L-204ENST00000465703 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
SKIV2L-204ENST00000465703 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
SKIV2L-204ENST00000465703 UBR4Q5T4S7 5183 aa4.37□□□□□ -1.71
SKIV2L-204ENST00000465703 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
SKIV2L-204ENST00000465703 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
SKIV2L-204ENST00000465703 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
SKIV2L-204ENST00000465703 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SKIV2L-204ENST00000465703 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
SKIV2L-204ENST00000465703 OBSCNQ5VST9 7968 aa4.11□□□□□ -1.75
SKIV2L-204ENST00000465703 KRTAP6-1Q3LI64 71 aa4.09□□□□□ -1.75
SKIV2L-204ENST00000465703 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.75
SKIV2L-204ENST00000465703 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.76
SKIV2L-204ENST00000465703 MUC2Q02817 5179 aa4.08□□□□□ -1.76
SKIV2L-204ENST00000465703 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
SKIV2L-204ENST00000465703 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
SKIV2L-204ENST00000465703 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
SKIV2L-204ENST00000465703 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
SKIV2L-204ENST00000465703 KRTAP9-2Q9BYQ4 174 aa3.98□□□□□ -1.77
SKIV2L-204ENST00000465703 MT4P47944 62 aa3.98□□□□□ -1.77
SKIV2L-204ENST00000465703 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.77
SKIV2L-204ENST00000465703 FSIP2Q5CZC0 6907 aa3.94□□□□□ -1.78
SKIV2L-204ENST00000465703 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
SKIV2L-204ENST00000465703 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
SKIV2L-204ENST00000465703 USH2AO75445 5202 aa3.73□□□□□ -1.81
SKIV2L-204ENST00000465703 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
SKIV2L-204ENST00000465703 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
SKIV2L-204ENST00000465703 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
SKIV2L-204ENST00000465703 KRTAP9-6A0A140TA67 174 aa3.56□□□□□ -1.84
SKIV2L-204ENST00000465703 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
SKIV2L-204ENST00000465703 KMT2DO14686 5537 aa3.45□□□□□ -1.86
SKIV2L-204ENST00000465703 KRTAP5-9P26371 169 aa3.4□□□□□ -1.87
SKIV2L-204ENST00000465703 KRTAP5-5Q701N2 237 aaPredicted RBP3.4□□□□□ -1.87
SKIV2L-204ENST00000465703 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
SKIV2L-204ENST00000465703 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
SKIV2L-204ENST00000465703 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
SKIV2L-204ENST00000465703 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
SKIV2L-204ENST00000465703 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
SKIV2L-204ENST00000465703 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
SKIV2L-204ENST00000465703 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SKIV2L-204ENST00000465703 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SKIV2L-204ENST00000465703 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SKIV2L-204ENST00000465703 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
SKIV2L-204ENST00000465703 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
SKIV2L-204ENST00000465703 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
SKIV2L-204ENST00000465703 MDN1Q9NU22 5596 aa3.07□□□□□ -1.92
SKIV2L-204ENST00000465703 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SKIV2L-204ENST00000465703 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
SKIV2L-204ENST00000465703 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SKIV2L-204ENST00000465703 NEBP20929 6669 aa2.93□□□□□ -1.94
SKIV2L-204ENST00000465703 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SKIV2L-204ENST00000465703 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
SKIV2L-204ENST00000465703 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
SKIV2L-204ENST00000465703 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
SKIV2L-204ENST00000465703 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
SKIV2L-204ENST00000465703 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
SKIV2L-204ENST00000465703 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
SKIV2L-204ENST00000465703 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SKIV2L-204ENST00000465703 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SKIV2L-204ENST00000465703 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
SKIV2L-204ENST00000465703 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
SKIV2L-204ENST00000465703 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
SKIV2L-204ENST00000465703 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SKIV2L-204ENST00000465703 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
SKIV2L-204ENST00000465703 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
SKIV2L-204ENST00000465703 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SKIV2L-204ENST00000465703 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
SKIV2L-204ENST00000465703 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
SKIV2L-204ENST00000465703 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
SKIV2L-204ENST00000465703 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 85.6 ms