RNA–Protein interactions for RNA: ENST00000464783.1

RPUSD3-211, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,149 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-211ENST00000464783 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
RPUSD3-211ENST00000464783 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
RPUSD3-211ENST00000464783 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
RPUSD3-211ENST00000464783 LCE5AQ5TCM9 118 aa4.36□□□□□ -1.71
RPUSD3-211ENST00000464783 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
RPUSD3-211ENST00000464783 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
RPUSD3-211ENST00000464783 KRTAP2-1Q9BYU5 128 aa4.35□□□□□ -1.71
RPUSD3-211ENST00000464783 PP632Q6XCG6 107 aa4.31□□□□□ -1.72
RPUSD3-211ENST00000464783 MT1GP13640 62 aa4.3□□□□□ -1.72
RPUSD3-211ENST00000464783 MT1LQ93083 61 aa4.29□□□□□ -1.72
RPUSD3-211ENST00000464783 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
RPUSD3-211ENST00000464783 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
RPUSD3-211ENST00000464783 ROMO1P60602 79 aa4.24□□□□□ -1.73
RPUSD3-211ENST00000464783 MT1MQ8N339 61 aa4.24□□□□□ -1.73
RPUSD3-211ENST00000464783 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
RPUSD3-211ENST00000464783 KRTAP4-3Q9BYR4 195 aa4.13□□□□□ -1.75
RPUSD3-211ENST00000464783 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.75
RPUSD3-211ENST00000464783 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
RPUSD3-211ENST00000464783 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
RPUSD3-211ENST00000464783 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
RPUSD3-211ENST00000464783 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
RPUSD3-211ENST00000464783 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
RPUSD3-211ENST00000464783 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
RPUSD3-211ENST00000464783 LCE4AQ5TA78 99 aa3.98□□□□□ -1.77
RPUSD3-211ENST00000464783 LCE3CQ5T5A8 94 aa3.96□□□□□ -1.78
RPUSD3-211ENST00000464783 MT4P47944 62 aa3.93□□□□□ -1.78
RPUSD3-211ENST00000464783 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
RPUSD3-211ENST00000464783 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
RPUSD3-211ENST00000464783 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
RPUSD3-211ENST00000464783 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
RPUSD3-211ENST00000464783 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
RPUSD3-211ENST00000464783 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
RPUSD3-211ENST00000464783 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
RPUSD3-211ENST00000464783 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
RPUSD3-211ENST00000464783 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
RPUSD3-211ENST00000464783 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
RPUSD3-211ENST00000464783 SPRR5A0A1B0GTR4 108 aa3.69□□□□□ -1.82
RPUSD3-211ENST00000464783 KRTAP9-6A8MVA2 160 aa3.69□□□□□ -1.82
RPUSD3-211ENST00000464783 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
RPUSD3-211ENST00000464783 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
RPUSD3-211ENST00000464783 MT1AP04731 61 aa3.66□□□□□ -1.82
RPUSD3-211ENST00000464783 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
RPUSD3-211ENST00000464783 AHNAK2Q8IVF2 5795 aa3.61□□□□□ -1.83
RPUSD3-211ENST00000464783 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
RPUSD3-211ENST00000464783 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
RPUSD3-211ENST00000464783 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
RPUSD3-211ENST00000464783 KRTAP6-2Q3LI66 62 aa3.44□□□□□ -1.86
RPUSD3-211ENST00000464783 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
RPUSD3-211ENST00000464783 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
RPUSD3-211ENST00000464783 MT3P25713 68 aa3.35□□□□□ -1.87
RPUSD3-211ENST00000464783 KRTAP4-11Q9BYQ6 195 aa3.33□□□□□ -1.88
RPUSD3-211ENST00000464783 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
RPUSD3-211ENST00000464783 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
RPUSD3-211ENST00000464783 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
RPUSD3-211ENST00000464783 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
RPUSD3-211ENST00000464783 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
RPUSD3-211ENST00000464783 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
RPUSD3-211ENST00000464783 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
RPUSD3-211ENST00000464783 LCE1EQ5T753 118 aa3□□□□□ -1.93
RPUSD3-211ENST00000464783 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
RPUSD3-211ENST00000464783 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
RPUSD3-211ENST00000464783 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
RPUSD3-211ENST00000464783 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
RPUSD3-211ENST00000464783 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
RPUSD3-211ENST00000464783 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
RPUSD3-211ENST00000464783 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
RPUSD3-211ENST00000464783 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
RPUSD3-211ENST00000464783 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
RPUSD3-211ENST00000464783 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
RPUSD3-211ENST00000464783 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
RPUSD3-211ENST00000464783 INE1O15225 51 aa2.37□□□□□ -2.03
RPUSD3-211ENST00000464783 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
RPUSD3-211ENST00000464783 PRM1P04553 51 aa2.22□□□□□ -2.05
RPUSD3-211ENST00000464783 PHGR1C9JFL3 82 aa2.17□□□□□ -2.06
RPUSD3-211ENST00000464783 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
RPUSD3-211ENST00000464783 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
RPUSD3-211ENST00000464783 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
RPUSD3-211ENST00000464783 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 155.5 ms