RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 V9GYY9 64 aa4.82□□□□□ -1.64
SNX17-205ENST00000464279 UQCR11O14957 56 aa4.81□□□□□ -1.64
SNX17-205ENST00000464279 Q1T7F1 81 aa4.8□□□□□ -1.64
SNX17-205ENST00000464279 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
SNX17-205ENST00000464279 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
SNX17-205ENST00000464279 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SNX17-205ENST00000464279 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
SNX17-205ENST00000464279 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
SNX17-205ENST00000464279 MT1EP04732 61 aa4.63□□□□□ -1.67
SNX17-205ENST00000464279 C10orf95Q9H7T3 257 aa4.63□□□□□ -1.67
SNX17-205ENST00000464279 AHNAKQ09666 5890 aaKnown RBP4.63□□□□□ -1.67
SNX17-205ENST00000464279 A6NED7 52 aa4.62□□□□□ -1.67
SNX17-205ENST00000464279 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
SNX17-205ENST00000464279 K7ERS5 55 aa4.58□□□□□ -1.68
SNX17-205ENST00000464279 TNP1P09430 55 aa4.57□□□□□ -1.68
SNX17-205ENST00000464279 MT1GP13640 62 aa4.54□□□□□ -1.68
SNX17-205ENST00000464279 KRTAP20-2Q3LI61 65 aa4.54□□□□□ -1.68
SNX17-205ENST00000464279 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
SNX17-205ENST00000464279 MUC5ACP98088 5654 aa4.53□□□□□ -1.68
SNX17-205ENST00000464279 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SNX17-205ENST00000464279 MT1MQ8N339 61 aa4.47□□□□□ -1.69
SNX17-205ENST00000464279 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
SNX17-205ENST00000464279 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SNX17-205ENST00000464279 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
SNX17-205ENST00000464279 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SNX17-205ENST00000464279 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
SNX17-205ENST00000464279 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
SNX17-205ENST00000464279 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
SNX17-205ENST00000464279 ROMO1P60602 79 aa4.32□□□□□ -1.72
SNX17-205ENST00000464279 KRTAP12-3P60328 96 aa4.3□□□□□ -1.72
SNX17-205ENST00000464279 MT1LQ93083 61 aa4.3□□□□□ -1.72
SNX17-205ENST00000464279 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
SNX17-205ENST00000464279 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SNX17-205ENST00000464279 KRTAP23-1A1A580 65 aa4.27□□□□□ -1.73
SNX17-205ENST00000464279 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
SNX17-205ENST00000464279 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
SNX17-205ENST00000464279 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SNX17-205ENST00000464279 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
SNX17-205ENST00000464279 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
SNX17-205ENST00000464279 KRTAP19-4Q3LI73 84 aa4.06□□□□□ -1.76
SNX17-205ENST00000464279 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
SNX17-205ENST00000464279 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
SNX17-205ENST00000464279 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SNX17-205ENST00000464279 LCE3CQ5T5A8 94 aa3.98□□□□□ -1.77
SNX17-205ENST00000464279 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
SNX17-205ENST00000464279 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SNX17-205ENST00000464279 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
SNX17-205ENST00000464279 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
SNX17-205ENST00000464279 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
SNX17-205ENST00000464279 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
SNX17-205ENST00000464279 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
SNX17-205ENST00000464279 MT1AP04731 61 aa3.66□□□□□ -1.82
SNX17-205ENST00000464279 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
SNX17-205ENST00000464279 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
SNX17-205ENST00000464279 SVIPQ8NHG7 77 aa3.49□□□□□ -1.85
SNX17-205ENST00000464279 MT3P25713 68 aa3.36□□□□□ -1.87
SNX17-205ENST00000464279 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
SNX17-205ENST00000464279 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
SNX17-205ENST00000464279 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SNX17-205ENST00000464279 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SNX17-205ENST00000464279 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
SNX17-205ENST00000464279 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SNX17-205ENST00000464279 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
SNX17-205ENST00000464279 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SNX17-205ENST00000464279 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
SNX17-205ENST00000464279 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
SNX17-205ENST00000464279 H3BS24 57 aa2.85□□□□□ -1.95
SNX17-205ENST00000464279 LCE3EQ5T5B0 92 aa2.78□□□□□ -1.96
SNX17-205ENST00000464279 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
SNX17-205ENST00000464279 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SNX17-205ENST00000464279 A0A0A0MQY5 61 aa2.56□□□□□ -2
SNX17-205ENST00000464279 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
SNX17-205ENST00000464279 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
SNX17-205ENST00000464279 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
SNX17-205ENST00000464279 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
SNX17-205ENST00000464279 INE1O15225 51 aa2.24□□□□□ -2.05
SNX17-205ENST00000464279 PRM1P04553 51 aa2.22□□□□□ -2.05
SNX17-205ENST00000464279 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 272 ms