RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 SPRR2DP22532 72 aa3.44□□□□□ -1.86
TRAPPC12-214ENST00000462983 LCE3AQ5TA76 89 aa3.44□□□□□ -1.86
TRAPPC12-214ENST00000462983 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
TRAPPC12-214ENST00000462983 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
TRAPPC12-214ENST00000462983 KRTAP23-1A1A580 65 aa3.41□□□□□ -1.86
TRAPPC12-214ENST00000462983 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
TRAPPC12-214ENST00000462983 MT1EP04732 61 aa3.38□□□□□ -1.87
TRAPPC12-214ENST00000462983 PMAIP1Q13794 54 aa3.36□□□□□ -1.87
TRAPPC12-214ENST00000462983 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
TRAPPC12-214ENST00000462983 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
TRAPPC12-214ENST00000462983 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
TRAPPC12-214ENST00000462983 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
TRAPPC12-214ENST00000462983 KRTAP12-3P60328 96 aa3.3□□□□□ -1.88
TRAPPC12-214ENST00000462983 MT1GP13640 62 aa3.27□□□□□ -1.89
TRAPPC12-214ENST00000462983 MT1LQ93083 61 aa3.25□□□□□ -1.89
TRAPPC12-214ENST00000462983 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
TRAPPC12-214ENST00000462983 MT1MQ8N339 61 aa3.22□□□□□ -1.89
TRAPPC12-214ENST00000462983 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
TRAPPC12-214ENST00000462983 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
TRAPPC12-214ENST00000462983 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
TRAPPC12-214ENST00000462983 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
TRAPPC12-214ENST00000462983 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
TRAPPC12-214ENST00000462983 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
TRAPPC12-214ENST00000462983 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
TRAPPC12-214ENST00000462983 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
TRAPPC12-214ENST00000462983 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
TRAPPC12-214ENST00000462983 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
TRAPPC12-214ENST00000462983 H3BS24 57 aa3.02□□□□□ -1.93
TRAPPC12-214ENST00000462983 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
TRAPPC12-214ENST00000462983 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
TRAPPC12-214ENST00000462983 MT4P47944 62 aa3.01□□□□□ -1.93
TRAPPC12-214ENST00000462983 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
TRAPPC12-214ENST00000462983 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
TRAPPC12-214ENST00000462983 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
TRAPPC12-214ENST00000462983 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
TRAPPC12-214ENST00000462983 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
TRAPPC12-214ENST00000462983 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
TRAPPC12-214ENST00000462983 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
TRAPPC12-214ENST00000462983 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC12-214ENST00000462983 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
TRAPPC12-214ENST00000462983 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
TRAPPC12-214ENST00000462983 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
TRAPPC12-214ENST00000462983 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
TRAPPC12-214ENST00000462983 MT1AP04731 61 aa2.78□□□□□ -1.96
TRAPPC12-214ENST00000462983 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
TRAPPC12-214ENST00000462983 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
TRAPPC12-214ENST00000462983 KRTAP9-4Q9BYQ2 154 aa2.67□□□□□ -1.98
TRAPPC12-214ENST00000462983 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
TRAPPC12-214ENST00000462983 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
TRAPPC12-214ENST00000462983 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
TRAPPC12-214ENST00000462983 LUZP6Q538Z0 58 aa2.58□□□□□ -2
TRAPPC12-214ENST00000462983 MUC5ACP98088 5654 aa2.57□□□□□ -2
TRAPPC12-214ENST00000462983 MT3P25713 68 aa2.57□□□□□ -2
TRAPPC12-214ENST00000462983 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
TRAPPC12-214ENST00000462983 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
TRAPPC12-214ENST00000462983 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
TRAPPC12-214ENST00000462983 OBSCNQ5VST9 7968 aa2.47□□□□□ -2.01
TRAPPC12-214ENST00000462983 KRTAP9-9Q9BYP9 154 aa2.44□□□□□ -2.02
TRAPPC12-214ENST00000462983 NDUFAF8A1L188 74 aa2.42□□□□□ -2.02
TRAPPC12-214ENST00000462983 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
TRAPPC12-214ENST00000462983 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
TRAPPC12-214ENST00000462983 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
TRAPPC12-214ENST00000462983 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
TRAPPC12-214ENST00000462983 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
TRAPPC12-214ENST00000462983 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
TRAPPC12-214ENST00000462983 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
TRAPPC12-214ENST00000462983 INE1O15225 51 aa2.14□□□□□ -2.07
TRAPPC12-214ENST00000462983 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
TRAPPC12-214ENST00000462983 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
TRAPPC12-214ENST00000462983 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
TRAPPC12-214ENST00000462983 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TRAPPC12-214ENST00000462983 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
TRAPPC12-214ENST00000462983 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
TRAPPC12-214ENST00000462983 PRM1P04553 51 aa1.8□□□□□ -2.12
TRAPPC12-214ENST00000462983 KRTAP4-4Q9BYR3 166 aa1.68□□□□□ -2.14
TRAPPC12-214ENST00000462983 MUC19Q7Z5P9 8384 aa1.51□□□□□ -2.17
TRAPPC12-214ENST00000462983 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
TRAPPC12-214ENST00000462983 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 162.1 ms