RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 TMEM167AQ8TBQ9 72 aa0.35□□□□□ -2.35
SMC4-203ENST00000462668 PLNP26678 52 aa0.34□□□□□ -2.35
SMC4-203ENST00000462668 ARHGAP5-AS1Q96IT6 56 aa0.34□□□□□ -2.35
SMC4-203ENST00000462668 NOP10Q9NPE3 64 aaKnown RBP0.34□□□□□ -2.35
SMC4-203ENST00000462668 H0YGX0 51 aa0.34□□□□□ -2.35
SMC4-203ENST00000462668 SPART-AS1P0CW21 52 aa0.34□□□□□ -2.35
SMC4-203ENST00000462668 GNG13Q9P2W3 67 aa0.34□□□□□ -2.35
SMC4-203ENST00000462668 SFTA3P0C7M3 94 aa0.34□□□□□ -2.36
SMC4-203ENST00000462668 C3orf79P0CE67 100 aa0.34□□□□□ -2.36
SMC4-203ENST00000462668 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 ATXN8Q156A1 80 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 SMIM2Q9BVW6 85 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 K7EIM0 57 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 IAPPP10997 89 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 NDUFA1O15239 70 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 MT1EP04732 61 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 RHPN1-AS1Q9BWJ2 59 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 HILPDAQ9Y5L2 63 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 C9orf92A6NGG3 77 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 H3BSH0 61 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 LINC01590Q5TEZ4 76 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 UBL5Q9BZL1 73 aa0.33□□□□□ -2.36
SMC4-203ENST00000462668 ETDCA0A1B0GVM5 59 aa0.32□□□□□ -2.36
SMC4-203ENST00000462668 LINC00158P58513 81 aa0.32□□□□□ -2.36
SMC4-203ENST00000462668 DEFB131AP59861 70 aa0.32□□□□□ -2.36
SMC4-203ENST00000462668 SMIM27A0A1W2PRY6 76 aa0.32□□□□□ -2.36
SMC4-203ENST00000462668 DEFB131BA0A096LNP1 70 aa0.32□□□□□ -2.36
SMC4-203ENST00000462668 KRTAP6-1Q3LI64 71 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 RPL39P5Q59GN2 51 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 TTTY10Q9BZA0 68 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 A0A096LPF7 62 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 LINC01556Q5JQF7 62 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 RPS27LQ71UM5 84 aaKnown RBP0.31□□□□□ -2.36
SMC4-203ENST00000462668 WFDC13Q8IUB5 93 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 KCNQ1DNQ9H478 68 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 LINC01546A6NGU7 62 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 H3BVH4 76 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 HTN3P15516 51 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 RPS29P62273 56 aaKnown RBP0.31□□□□□ -2.36
SMC4-203ENST00000462668 DEFB105AQ8NG35 78 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 LEAP2Q969E1 77 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 TOMM7Q9P0U1 55 aa0.31□□□□□ -2.36
SMC4-203ENST00000462668 DEFB130BP0DP73 79 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 DEFB130AP0DP74 79 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 HTN1P15515 57 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 MT1MQ8N339 61 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 WT1-ASQ06250 92 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 M0QY20 66 aa0.3□□□□□ -2.36
SMC4-203ENST00000462668 RPS27P42677 84 aaKnown RBP0.3□□□□□ -2.36
SMC4-203ENST00000462668 POLR2KP53803 58 aaKnown RBP0.3□□□□□ -2.36
SMC4-203ENST00000462668 SYNE1Q8NF91 8797 aaKnown RBP0.29□□□□□ -2.36
SMC4-203ENST00000462668 LINC00308Q8TCZ7 52 aa0.29□□□□□ -2.36
SMC4-203ENST00000462668 IGIPA6NJ69 53 aa0.29□□□□□ -2.36
SMC4-203ENST00000462668 APELAP0DMC3 54 aa0.29□□□□□ -2.36
SMC4-203ENST00000462668 H0YAA0 97 aa0.28□□□□□ -2.36
SMC4-203ENST00000462668 KRTAP8-1Q8IUC2 63 aa0.28□□□□□ -2.36
SMC4-203ENST00000462668 RPL39LQ96EH5 51 aaKnown RBP0.28□□□□□ -2.36
SMC4-203ENST00000462668 IGLV5-48A0A075B6I7 105 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 CRIP1P50238 77 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 RPL39P62891 51 aaKnown RBP0.27□□□□□ -2.37
SMC4-203ENST00000462668 CLPSL2Q6UWE3 100 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 C6orf48Q9UBA6 75 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 M0QZ58 72 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 ENHOQ6UWT2 76 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 PRM1P04553 51 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 WFDC10BQ8IUB3 73 aa0.27□□□□□ -2.37
SMC4-203ENST00000462668 MT1GP13640 62 aa0.26□□□□□ -2.37
SMC4-203ENST00000462668 A0A096LNI7 61 aa0.26□□□□□ -2.37
SMC4-203ENST00000462668 DEFB4AO15263 64 aa0.26□□□□□ -2.37
SMC4-203ENST00000462668 S4R3F8 94 aa0.26□□□□□ -2.37
SMC4-203ENST00000462668 MMP24-AS1A0A0U1RRL7 71 aa0.25□□□□□ -2.37
SMC4-203ENST00000462668 PRLHP81277 87 aa0.25□□□□□ -2.37
SMC4-203ENST00000462668 TNP1P09430 55 aa0.25□□□□□ -2.37
SMC4-203ENST00000462668 MT1LQ93083 61 aa0.25□□□□□ -2.37
SMC4-203ENST00000462668 DEFB1P60022 68 aa0.24□□□□□ -2.37
SMC4-203ENST00000462668 KRTAP6-2Q3LI66 62 aa0.19□□□□□ -2.38
SMC4-203ENST00000462668 MT1AP04731 61 aa0.19□□□□□ -2.38
SMC4-203ENST00000462668 KRTAP19-5Q3LI72 72 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 184.8 ms