RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 KRTAP19-8Q3LI54 63 aa1.74□□□□□ -2.13
ATP13A3-206ENST00000461660 MT1BP07438 61 aa1.71□□□□□ -2.14
ATP13A3-206ENST00000461660 FSIP2Q5CZC0 6907 aa1.69□□□□□ -2.14
ATP13A3-206ENST00000461660 KRTAP10-12P60413 245 aa1.68□□□□□ -2.14
ATP13A3-206ENST00000461660 MT1XP80297 61 aa1.66□□□□□ -2.14
ATP13A3-206ENST00000461660 KRTAP23-1A1A580 65 aa1.66□□□□□ -2.14
ATP13A3-206ENST00000461660 KRTAP10-5P60370 271 aa1.65□□□□□ -2.14
ATP13A3-206ENST00000461660 LCE3AQ5TA76 89 aa1.64□□□□□ -2.15
ATP13A3-206ENST00000461660 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
ATP13A3-206ENST00000461660 KRTAP12-3P60328 96 aa1.61□□□□□ -2.15
ATP13A3-206ENST00000461660 KRTAP10-7P60409 375 aaPredicted RBP1.61□□□□□ -2.15
ATP13A3-206ENST00000461660 KRTAP5-5Q701N2 237 aaPredicted RBP1.61□□□□□ -2.15
ATP13A3-206ENST00000461660 KRTAP4-4Q9BYR3 166 aa1.6□□□□□ -2.15
ATP13A3-206ENST00000461660 USH2AO75445 5202 aa1.6□□□□□ -2.15
ATP13A3-206ENST00000461660 KRTAP19-6Q3LI70 58 aa1.59□□□□□ -2.16
ATP13A3-206ENST00000461660 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.16
ATP13A3-206ENST00000461660 KRTAP15-1Q3LI76 137 aa1.58□□□□□ -2.16
ATP13A3-206ENST00000461660 SSPOA2VEC9 5147 aa1.56□□□□□ -2.16
ATP13A3-206ENST00000461660 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
ATP13A3-206ENST00000461660 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
ATP13A3-206ENST00000461660 SPRR2FQ96RM1 72 aa1.5□□□□□ -2.17
ATP13A3-206ENST00000461660 FCGBPQ9Y6R7 5405 aaPredicted RBP1.5□□□□□ -2.17
ATP13A3-206ENST00000461660 OBSCNQ5VST9 7968 aa1.49□□□□□ -2.17
ATP13A3-206ENST00000461660 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
ATP13A3-206ENST00000461660 MACF1Q9UPN3 7388 aaKnown RBP1.49□□□□□ -2.17
ATP13A3-206ENST00000461660 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
ATP13A3-206ENST00000461660 MT1EP04732 61 aa1.47□□□□□ -2.17
ATP13A3-206ENST00000461660 KRTAP19-7Q3SYF9 63 aa1.47□□□□□ -2.17
ATP13A3-206ENST00000461660 LCE3CQ5T5A8 94 aa1.47□□□□□ -2.17
ATP13A3-206ENST00000461660 MT1LQ93083 61 aa1.45□□□□□ -2.18
ATP13A3-206ENST00000461660 SPRR5A0A1B0GTR4 108 aa1.44□□□□□ -2.18
ATP13A3-206ENST00000461660 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
ATP13A3-206ENST00000461660 MT1GP13640 62 aa1.43□□□□□ -2.18
ATP13A3-206ENST00000461660 KRTAP19-3Q7Z4W3 81 aa1.43□□□□□ -2.18
ATP13A3-206ENST00000461660 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
ATP13A3-206ENST00000461660 SPRR2EP22531 72 aa1.42□□□□□ -2.18
ATP13A3-206ENST00000461660 SPRR2BP35325 72 aa1.42□□□□□ -2.18
ATP13A3-206ENST00000461660 SPRR2AP35326 72 aa1.42□□□□□ -2.18
ATP13A3-206ENST00000461660 SYNE1Q8NF91 8797 aaKnown RBP1.41□□□□□ -2.18
ATP13A3-206ENST00000461660 KMT2DO14686 5537 aa1.4□□□□□ -2.18
ATP13A3-206ENST00000461660 MT1MQ8N339 61 aa1.39□□□□□ -2.19
ATP13A3-206ENST00000461660 MUC12Q9UKN1 5478 aa1.38□□□□□ -2.19
ATP13A3-206ENST00000461660 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
ATP13A3-206ENST00000461660 KRTAP6-3Q3LI67 103 aa1.38□□□□□ -2.19
ATP13A3-206ENST00000461660 SPRR2DP22532 72 aa1.37□□□□□ -2.19
ATP13A3-206ENST00000461660 NEBP20929 6669 aa1.37□□□□□ -2.19
ATP13A3-206ENST00000461660 MDN1Q9NU22 5596 aa1.36□□□□□ -2.19
ATP13A3-206ENST00000461660 LCE1AQ5T7P2 110 aa1.35□□□□□ -2.19
ATP13A3-206ENST00000461660 KRTAP4-3Q9BYR4 195 aa1.35□□□□□ -2.19
ATP13A3-206ENST00000461660 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.2
ATP13A3-206ENST00000461660 DSTQ03001 7570 aaKnown RBP1.32□□□□□ -2.2
ATP13A3-206ENST00000461660 KRTAP9-6A8MVA2 160 aa1.32□□□□□ -2.2
ATP13A3-206ENST00000461660 LCE1EQ5T753 118 aa1.3□□□□□ -2.2
ATP13A3-206ENST00000461660 KRTAP2-2Q9BYT5 123 aa1.27□□□□□ -2.21
ATP13A3-206ENST00000461660 INE1O15225 51 aa1.26□□□□□ -2.21
ATP13A3-206ENST00000461660 MT1AP04731 61 aa1.25□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP12-4P60329 112 aa1.24□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP2-3P0C7H8 128 aa1.24□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP2-4Q9BYR9 128 aa1.24□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP2-1Q9BYU5 128 aa1.24□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
ATP13A3-206ENST00000461660 KRTAP6-1Q3LI64 71 aa1.21□□□□□ -2.22
ATP13A3-206ENST00000461660 MT3P25713 68 aa1.2□□□□□ -2.22
ATP13A3-206ENST00000461660 MT4P47944 62 aa1.19□□□□□ -2.22
ATP13A3-206ENST00000461660 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
ATP13A3-206ENST00000461660 LCE3DQ9BYE3 92 aa1.15□□□□□ -2.23
ATP13A3-206ENST00000461660 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
ATP13A3-206ENST00000461660 LCE3EQ5T5B0 92 aa1.12□□□□□ -2.23
ATP13A3-206ENST00000461660 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
ATP13A3-206ENST00000461660 KRTAP20-2Q3LI61 65 aa1.1□□□□□ -2.23
ATP13A3-206ENST00000461660 LCE1FQ5T754 118 aa1.1□□□□□ -2.23
ATP13A3-206ENST00000461660 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
ATP13A3-206ENST00000461660 PRM1P04553 51 aa0.98□□□□□ -2.25
ATP13A3-206ENST00000461660 LCE1CQ5T751 118 aa0.87□□□□□ -2.27
ATP13A3-206ENST00000461660 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
ATP13A3-206ENST00000461660 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
ATP13A3-206ENST00000461660 PHGR1C9JFL3 82 aa0.65□□□□□ -2.3
ATP13A3-206ENST00000461660 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms