RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
COL9A2-205ENST00000461118 MT4P47944 62 aa6.59□□□□□ -1.35
COL9A2-205ENST00000461118 LCE4AQ5TA78 99 aa6.59□□□□□ -1.35
COL9A2-205ENST00000461118 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
COL9A2-205ENST00000461118 MIR22HGQ0VDD5 57 aa6.55□□□□□ -1.36
COL9A2-205ENST00000461118 PP632Q6XCG6 107 aa6.55□□□□□ -1.36
COL9A2-205ENST00000461118 MT1LQ93083 61 aa6.54□□□□□ -1.36
COL9A2-205ENST00000461118 V9GYY9 64 aa6.54□□□□□ -1.36
COL9A2-205ENST00000461118 Q1T7F1 81 aa6.51□□□□□ -1.37
COL9A2-205ENST00000461118 MT1MQ8N339 61 aa6.49□□□□□ -1.37
COL9A2-205ENST00000461118 PSPHP1O15172 72 aa6.46□□□□□ -1.38
COL9A2-205ENST00000461118 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
COL9A2-205ENST00000461118 KRTAP4-6Q9BYQ5 205 aa6.42□□□□□ -1.38
COL9A2-205ENST00000461118 K7ERS5 55 aa6.41□□□□□ -1.38
COL9A2-205ENST00000461118 KRTAP12-3P60328 96 aa6.39□□□□□ -1.39
COL9A2-205ENST00000461118 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
COL9A2-205ENST00000461118 KRTAP5-7Q6L8G8 165 aa6.35□□□□□ -1.39
COL9A2-205ENST00000461118 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
COL9A2-205ENST00000461118 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
COL9A2-205ENST00000461118 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
COL9A2-205ENST00000461118 A6NED7 52 aa6.25□□□□□ -1.41
COL9A2-205ENST00000461118 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
COL9A2-205ENST00000461118 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
COL9A2-205ENST00000461118 PCP4P48539 62 aa6.18□□□□□ -1.42
COL9A2-205ENST00000461118 KRTAP19-4Q3LI73 84 aa6.11□□□□□ -1.43
COL9A2-205ENST00000461118 KRTAP20-2Q3LI61 65 aa6.1□□□□□ -1.43
COL9A2-205ENST00000461118 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
COL9A2-205ENST00000461118 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
COL9A2-205ENST00000461118 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
COL9A2-205ENST00000461118 SPRR5A0A1B0GTR4 108 aa6□□□□□ -1.45
COL9A2-205ENST00000461118 ROMO1P60602 79 aa6□□□□□ -1.45
COL9A2-205ENST00000461118 LCE3CQ5T5A8 94 aa5.9□□□□□ -1.46
COL9A2-205ENST00000461118 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
COL9A2-205ENST00000461118 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
COL9A2-205ENST00000461118 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.48
COL9A2-205ENST00000461118 KRTAP4-11Q9BYQ6 195 aa5.68□□□□□ -1.5
COL9A2-205ENST00000461118 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
COL9A2-205ENST00000461118 MT1AP04731 61 aa5.57□□□□□ -1.52
COL9A2-205ENST00000461118 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
COL9A2-205ENST00000461118 MUC5ACP98088 5654 aa5.55□□□□□ -1.52
COL9A2-205ENST00000461118 AHNAKQ09666 5890 aaKnown RBP5.53□□□□□ -1.52
COL9A2-205ENST00000461118 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
COL9A2-205ENST00000461118 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
COL9A2-205ENST00000461118 MUC5BQ9HC84 5762 aaPredicted RBP5.5□□□□□ -1.53
COL9A2-205ENST00000461118 BRK1Q8WUW1 75 aa5.42□□□□□ -1.54
COL9A2-205ENST00000461118 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
COL9A2-205ENST00000461118 KRTAP9-4Q9BYQ2 154 aa5.39□□□□□ -1.55
COL9A2-205ENST00000461118 KRTAP6-2Q3LI66 62 aa5.26□□□□□ -1.57
COL9A2-205ENST00000461118 KRTAP9-9Q9BYP9 154 aa5.24□□□□□ -1.57
COL9A2-205ENST00000461118 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
COL9A2-205ENST00000461118 MT3P25713 68 aa5.1□□□□□ -1.59
COL9A2-205ENST00000461118 KRTAP5-1Q6L8H4 278 aa5.1□□□□□ -1.59
COL9A2-205ENST00000461118 H3BS24 57 aa4.94□□□□□ -1.62
COL9A2-205ENST00000461118 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
COL9A2-205ENST00000461118 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
COL9A2-205ENST00000461118 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
COL9A2-205ENST00000461118 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
COL9A2-205ENST00000461118 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
COL9A2-205ENST00000461118 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
COL9A2-205ENST00000461118 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
COL9A2-205ENST00000461118 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
COL9A2-205ENST00000461118 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
COL9A2-205ENST00000461118 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
COL9A2-205ENST00000461118 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
COL9A2-205ENST00000461118 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
COL9A2-205ENST00000461118 LCE3EQ5T5B0 92 aa4.03□□□□□ -1.76
COL9A2-205ENST00000461118 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
COL9A2-205ENST00000461118 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
COL9A2-205ENST00000461118 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
COL9A2-205ENST00000461118 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
COL9A2-205ENST00000461118 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
COL9A2-205ENST00000461118 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
COL9A2-205ENST00000461118 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
COL9A2-205ENST00000461118 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
COL9A2-205ENST00000461118 PRM1P04553 51 aa3.05□□□□□ -1.92
COL9A2-205ENST00000461118 INE1O15225 51 aa2.9□□□□□ -1.95
COL9A2-205ENST00000461118 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
COL9A2-205ENST00000461118 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms