RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 PSPHP1O15172 72 aa3.16□□□□□ -1.9
SND1-202ENST00000461056 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.91
SND1-202ENST00000461056 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
SND1-202ENST00000461056 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
SND1-202ENST00000461056 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
SND1-202ENST00000461056 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SND1-202ENST00000461056 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
SND1-202ENST00000461056 MT1EP04732 61 aa3.06□□□□□ -1.92
SND1-202ENST00000461056 SPRR2EP22531 72 aa3.04□□□□□ -1.92
SND1-202ENST00000461056 SPRR2BP35325 72 aa3.04□□□□□ -1.92
SND1-202ENST00000461056 SPRR2AP35326 72 aa3.04□□□□□ -1.92
SND1-202ENST00000461056 A6NED7 52 aa3.03□□□□□ -1.92
SND1-202ENST00000461056 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
SND1-202ENST00000461056 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
SND1-202ENST00000461056 TNP1P09430 55 aa3.01□□□□□ -1.93
SND1-202ENST00000461056 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
SND1-202ENST00000461056 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
SND1-202ENST00000461056 KRTAP25-1Q3LHN0 102 aa2.96□□□□□ -1.94
SND1-202ENST00000461056 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
SND1-202ENST00000461056 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
SND1-202ENST00000461056 K7ERS5 55 aa2.95□□□□□ -1.94
SND1-202ENST00000461056 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
SND1-202ENST00000461056 SPRR2DP22532 72 aa2.94□□□□□ -1.94
SND1-202ENST00000461056 MT1LQ93083 61 aa2.94□□□□□ -1.94
SND1-202ENST00000461056 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
SND1-202ENST00000461056 MT3P25713 68 aa2.91□□□□□ -1.94
SND1-202ENST00000461056 MT1GP13640 62 aa2.9□□□□□ -1.95
SND1-202ENST00000461056 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
SND1-202ENST00000461056 MT1MQ8N339 61 aa2.88□□□□□ -1.95
SND1-202ENST00000461056 DSTQ03001 7570 aaKnown RBP2.88□□□□□ -1.95
SND1-202ENST00000461056 ROMO1P60602 79 aa2.87□□□□□ -1.95
SND1-202ENST00000461056 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
SND1-202ENST00000461056 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
SND1-202ENST00000461056 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
SND1-202ENST00000461056 PRO0628Q9UI54 55 aa2.77□□□□□ -1.97
SND1-202ENST00000461056 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SND1-202ENST00000461056 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
SND1-202ENST00000461056 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
SND1-202ENST00000461056 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
SND1-202ENST00000461056 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
SND1-202ENST00000461056 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
SND1-202ENST00000461056 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
SND1-202ENST00000461056 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
SND1-202ENST00000461056 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
SND1-202ENST00000461056 PMAIP1Q13794 54 aa2.66□□□□□ -1.98
SND1-202ENST00000461056 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
SND1-202ENST00000461056 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
SND1-202ENST00000461056 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
SND1-202ENST00000461056 SYNE1Q8NF91 8797 aaKnown RBP2.57□□□□□ -2
SND1-202ENST00000461056 MT4P47944 62 aa2.55□□□□□ -2
SND1-202ENST00000461056 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
SND1-202ENST00000461056 SPRR5A0A1B0GTR4 108 aa2.51□□□□□ -2.01
SND1-202ENST00000461056 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
SND1-202ENST00000461056 MT1AP04731 61 aa2.49□□□□□ -2.01
SND1-202ENST00000461056 KRTAP6-1Q3LI64 71 aa2.48□□□□□ -2.01
SND1-202ENST00000461056 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
SND1-202ENST00000461056 OBSCNQ5VST9 7968 aa2.46□□□□□ -2.02
SND1-202ENST00000461056 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
SND1-202ENST00000461056 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SND1-202ENST00000461056 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
SND1-202ENST00000461056 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
SND1-202ENST00000461056 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
SND1-202ENST00000461056 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SND1-202ENST00000461056 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
SND1-202ENST00000461056 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SND1-202ENST00000461056 KRTAP5-8O75690 187 aa2.18□□□□□ -2.06
SND1-202ENST00000461056 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
SND1-202ENST00000461056 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
SND1-202ENST00000461056 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
SND1-202ENST00000461056 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
SND1-202ENST00000461056 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
SND1-202ENST00000461056 INE1O15225 51 aa1.81□□□□□ -2.12
SND1-202ENST00000461056 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SND1-202ENST00000461056 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SND1-202ENST00000461056 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
SND1-202ENST00000461056 PRM1P04553 51 aa1.48□□□□□ -2.17
SND1-202ENST00000461056 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
SND1-202ENST00000461056 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 56.3 ms