RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
CHRD-208ENST00000460627 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
CHRD-208ENST00000460627 MUC2Q02817 5179 aa5.86□□□□□ -1.47
CHRD-208ENST00000460627 FSIP2Q5CZC0 6907 aa5.79□□□□□ -1.48
CHRD-208ENST00000460627 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
CHRD-208ENST00000460627 MT1MQ8N339 61 aa5.73□□□□□ -1.49
CHRD-208ENST00000460627 SYNE1Q8NF91 8797 aaKnown RBP5.66□□□□□ -1.5
CHRD-208ENST00000460627 KRTAP19-7Q3SYF9 63 aa5.64□□□□□ -1.51
CHRD-208ENST00000460627 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
CHRD-208ENST00000460627 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
CHRD-208ENST00000460627 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
CHRD-208ENST00000460627 KRTAP4-3Q9BYR4 195 aa5.45□□□□□ -1.54
CHRD-208ENST00000460627 MT3P25713 68 aa5.41□□□□□ -1.54
CHRD-208ENST00000460627 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CHRD-208ENST00000460627 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
CHRD-208ENST00000460627 KRTAP6-3Q3LI67 103 aa5.35□□□□□ -1.55
CHRD-208ENST00000460627 MT4P47944 62 aa5.32□□□□□ -1.56
CHRD-208ENST00000460627 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
CHRD-208ENST00000460627 MT1AP04731 61 aa5.29□□□□□ -1.56
CHRD-208ENST00000460627 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.23□□□□□ -1.57
CHRD-208ENST00000460627 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
CHRD-208ENST00000460627 USH2AO75445 5202 aa5.17□□□□□ -1.58
CHRD-208ENST00000460627 SYNE2Q8WXH0 6885 aaKnown RBP5.15□□□□□ -1.59
CHRD-208ENST00000460627 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
CHRD-208ENST00000460627 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
CHRD-208ENST00000460627 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
CHRD-208ENST00000460627 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
CHRD-208ENST00000460627 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
CHRD-208ENST00000460627 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
CHRD-208ENST00000460627 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
CHRD-208ENST00000460627 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
CHRD-208ENST00000460627 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
CHRD-208ENST00000460627 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
CHRD-208ENST00000460627 LCE1BQ5T7P3 118 aa4.91□□□□□ -1.62
CHRD-208ENST00000460627 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
CHRD-208ENST00000460627 FCGBPQ9Y6R7 5405 aaPredicted RBP4.87□□□□□ -1.63
CHRD-208ENST00000460627 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
CHRD-208ENST00000460627 PRM1P04553 51 aa4.86□□□□□ -1.63
CHRD-208ENST00000460627 KMT2DO14686 5537 aa4.86□□□□□ -1.63
CHRD-208ENST00000460627 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
CHRD-208ENST00000460627 KRTAP5-9P26371 169 aa4.8□□□□□ -1.64
CHRD-208ENST00000460627 DSTQ03001 7570 aaKnown RBP4.77□□□□□ -1.65
CHRD-208ENST00000460627 MACF1Q9UPN3 7388 aaKnown RBP4.72□□□□□ -1.65
CHRD-208ENST00000460627 SSPOA2VEC9 5147 aa4.72□□□□□ -1.65
CHRD-208ENST00000460627 MUC12Q9UKN1 5478 aa4.56□□□□□ -1.68
CHRD-208ENST00000460627 NEBP20929 6669 aa4.51□□□□□ -1.69
CHRD-208ENST00000460627 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
CHRD-208ENST00000460627 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CHRD-208ENST00000460627 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
CHRD-208ENST00000460627 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
CHRD-208ENST00000460627 LCE1CQ5T751 118 aa4.05□□□□□ -1.76
CHRD-208ENST00000460627 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CHRD-208ENST00000460627 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
CHRD-208ENST00000460627 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
CHRD-208ENST00000460627 GPR98Q8WXG9 6306 aa4.02□□□□□ -1.77
CHRD-208ENST00000460627 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
CHRD-208ENST00000460627 MUC19Q7Z5P9 8384 aa3.93□□□□□ -1.78
CHRD-208ENST00000460627 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
CHRD-208ENST00000460627 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
CHRD-208ENST00000460627 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
CHRD-208ENST00000460627 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
CHRD-208ENST00000460627 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CHRD-208ENST00000460627 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CHRD-208ENST00000460627 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
CHRD-208ENST00000460627 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
CHRD-208ENST00000460627 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
CHRD-208ENST00000460627 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
CHRD-208ENST00000460627 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
CHRD-208ENST00000460627 KRTAP5-1Q6L8H4 278 aa2.94□□□□□ -1.94
CHRD-208ENST00000460627 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.94
CHRD-208ENST00000460627 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
CHRD-208ENST00000460627 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
CHRD-208ENST00000460627 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CHRD-208ENST00000460627 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CHRD-208ENST00000460627 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
CHRD-208ENST00000460627 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CHRD-208ENST00000460627 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
CHRD-208ENST00000460627 MUC16Q8WXI7 14507 aa1.66□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 169.7 ms