RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
EPB41-208ENST00000460378 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
EPB41-208ENST00000460378 KRTAP19-5Q3LI72 72 aa3.7□□□□□ -1.82
EPB41-208ENST00000460378 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
EPB41-208ENST00000460378 MT1GP13640 62 aa3.68□□□□□ -1.82
EPB41-208ENST00000460378 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
EPB41-208ENST00000460378 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
EPB41-208ENST00000460378 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
EPB41-208ENST00000460378 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
EPB41-208ENST00000460378 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
EPB41-208ENST00000460378 MT4P47944 62 aa3.56□□□□□ -1.84
EPB41-208ENST00000460378 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
EPB41-208ENST00000460378 MUC2Q02817 5179 aa3.54□□□□□ -1.84
EPB41-208ENST00000460378 NEBP20929 6669 aa3.47□□□□□ -1.85
EPB41-208ENST00000460378 SSPOA2VEC9 5147 aa3.45□□□□□ -1.86
EPB41-208ENST00000460378 USH2AO75445 5202 aa3.44□□□□□ -1.86
EPB41-208ENST00000460378 MT1EP04732 61 aa3.43□□□□□ -1.86
EPB41-208ENST00000460378 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
EPB41-208ENST00000460378 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
EPB41-208ENST00000460378 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
EPB41-208ENST00000460378 MT1MQ8N339 61 aa3.35□□□□□ -1.87
EPB41-208ENST00000460378 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
EPB41-208ENST00000460378 MT1LQ93083 61 aa3.34□□□□□ -1.88
EPB41-208ENST00000460378 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.88
EPB41-208ENST00000460378 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
EPB41-208ENST00000460378 KMT2DO14686 5537 aa3.21□□□□□ -1.9
EPB41-208ENST00000460378 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
EPB41-208ENST00000460378 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
EPB41-208ENST00000460378 GPR98Q8WXG9 6306 aa3.18□□□□□ -1.9
EPB41-208ENST00000460378 MT3P25713 68 aa3.13□□□□□ -1.91
EPB41-208ENST00000460378 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.91
EPB41-208ENST00000460378 KRTAP4-7Q9BYR0 210 aa3.09□□□□□ -1.91
EPB41-208ENST00000460378 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
EPB41-208ENST00000460378 MT1AP04731 61 aa3.02□□□□□ -1.93
EPB41-208ENST00000460378 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
EPB41-208ENST00000460378 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
EPB41-208ENST00000460378 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
EPB41-208ENST00000460378 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
EPB41-208ENST00000460378 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
EPB41-208ENST00000460378 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
EPB41-208ENST00000460378 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
EPB41-208ENST00000460378 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
EPB41-208ENST00000460378 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
EPB41-208ENST00000460378 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
EPB41-208ENST00000460378 KRTAP20-2Q3LI61 65 aa2.82□□□□□ -1.96
EPB41-208ENST00000460378 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
EPB41-208ENST00000460378 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
EPB41-208ENST00000460378 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
EPB41-208ENST00000460378 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
EPB41-208ENST00000460378 KRTAP5-3Q6L8H2 238 aa2.72□□□□□ -1.97
EPB41-208ENST00000460378 PRM1P04553 51 aa2.72□□□□□ -1.97
EPB41-208ENST00000460378 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
EPB41-208ENST00000460378 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
EPB41-208ENST00000460378 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
EPB41-208ENST00000460378 HMCN1Q96RW7 5635 aa2.59□□□□□ -1.99
EPB41-208ENST00000460378 LCE1CQ5T751 118 aa2.57□□□□□ -2
EPB41-208ENST00000460378 LCE1EQ5T753 118 aa2.57□□□□□ -2
EPB41-208ENST00000460378 LCE1FQ5T754 118 aa2.57□□□□□ -2
EPB41-208ENST00000460378 KRTAP9-6A8MVA2 160 aa2.56□□□□□ -2
EPB41-208ENST00000460378 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
EPB41-208ENST00000460378 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
EPB41-208ENST00000460378 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
EPB41-208ENST00000460378 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
EPB41-208ENST00000460378 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
EPB41-208ENST00000460378 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
EPB41-208ENST00000460378 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
EPB41-208ENST00000460378 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
EPB41-208ENST00000460378 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
EPB41-208ENST00000460378 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
EPB41-208ENST00000460378 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
EPB41-208ENST00000460378 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
EPB41-208ENST00000460378 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
EPB41-208ENST00000460378 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
EPB41-208ENST00000460378 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
EPB41-208ENST00000460378 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
EPB41-208ENST00000460378 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
EPB41-208ENST00000460378 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
EPB41-208ENST00000460378 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms