RNA–Protein interactions for RNA: ENST00000457354.6

TMX1-201, Transcript of thioredoxin related transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMX1, Length 3,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX1-201ENST00000457354 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
TMX1-201ENST00000457354 LOC100996750A0A140TA64 210 aa4.3□□□□□ -1.72
TMX1-201ENST00000457354 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
TMX1-201ENST00000457354 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
TMX1-201ENST00000457354 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
TMX1-201ENST00000457354 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
TMX1-201ENST00000457354 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
TMX1-201ENST00000457354 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
TMX1-201ENST00000457354 MUC12Q9UKN1 5478 aa4.17□□□□□ -1.74
TMX1-201ENST00000457354 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.74
TMX1-201ENST00000457354 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
TMX1-201ENST00000457354 MT1MQ8N339 61 aa4.13□□□□□ -1.75
TMX1-201ENST00000457354 SPRR2EP22531 72 aa4.08□□□□□ -1.76
TMX1-201ENST00000457354 SPRR2BP35325 72 aa4.08□□□□□ -1.76
TMX1-201ENST00000457354 SPRR2AP35326 72 aa4.08□□□□□ -1.76
TMX1-201ENST00000457354 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
TMX1-201ENST00000457354 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.77
TMX1-201ENST00000457354 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.77
TMX1-201ENST00000457354 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.77
TMX1-201ENST00000457354 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
TMX1-201ENST00000457354 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
TMX1-201ENST00000457354 SPRR2DP22532 72 aa3.9□□□□□ -1.79
TMX1-201ENST00000457354 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
TMX1-201ENST00000457354 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TMX1-201ENST00000457354 KRTAP9-2Q9BYQ4 174 aa3.86□□□□□ -1.79
TMX1-201ENST00000457354 LCE5AQ5TCM9 118 aa3.78□□□□□ -1.8
TMX1-201ENST00000457354 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
TMX1-201ENST00000457354 PRM1P04553 51 aa3.7□□□□□ -1.82
TMX1-201ENST00000457354 MT1AP04731 61 aa3.7□□□□□ -1.82
TMX1-201ENST00000457354 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.82
TMX1-201ENST00000457354 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
TMX1-201ENST00000457354 MT4P47944 62 aa3.61□□□□□ -1.83
TMX1-201ENST00000457354 MT3P25713 68 aa3.59□□□□□ -1.83
TMX1-201ENST00000457354 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
TMX1-201ENST00000457354 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.85
TMX1-201ENST00000457354 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
TMX1-201ENST00000457354 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
TMX1-201ENST00000457354 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
TMX1-201ENST00000457354 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
TMX1-201ENST00000457354 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
TMX1-201ENST00000457354 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
TMX1-201ENST00000457354 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TMX1-201ENST00000457354 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
TMX1-201ENST00000457354 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
TMX1-201ENST00000457354 KRTAP4-6Q9BYQ5 205 aa3.21□□□□□ -1.89
TMX1-201ENST00000457354 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
TMX1-201ENST00000457354 NEBP20929 6669 aa3.06□□□□□ -1.92
TMX1-201ENST00000457354 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
TMX1-201ENST00000457354 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
TMX1-201ENST00000457354 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
TMX1-201ENST00000457354 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
TMX1-201ENST00000457354 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
TMX1-201ENST00000457354 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
TMX1-201ENST00000457354 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
TMX1-201ENST00000457354 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
TMX1-201ENST00000457354 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
TMX1-201ENST00000457354 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
TMX1-201ENST00000457354 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
TMX1-201ENST00000457354 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
TMX1-201ENST00000457354 LCE1CQ5T751 118 aa2.53□□□□□ -2
TMX1-201ENST00000457354 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
TMX1-201ENST00000457354 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
TMX1-201ENST00000457354 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
TMX1-201ENST00000457354 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
TMX1-201ENST00000457354 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
TMX1-201ENST00000457354 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
TMX1-201ENST00000457354 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
TMX1-201ENST00000457354 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
TMX1-201ENST00000457354 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
TMX1-201ENST00000457354 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TMX1-201ENST00000457354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
TMX1-201ENST00000457354 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
TMX1-201ENST00000457354 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
TMX1-201ENST00000457354 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TMX1-201ENST00000457354 KRTAP5-7Q6L8G8 165 aa1.77□□□□□ -2.13
TMX1-201ENST00000457354 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TMX1-201ENST00000457354 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 63.5 ms