RNA–Protein interactions for RNA: ENST00000457054.6

PDCD6IP-206, Transcript of programmed cell death 6 interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6IP, Length 5,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-206ENST00000457054 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
PDCD6IP-206ENST00000457054 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
PDCD6IP-206ENST00000457054 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
PDCD6IP-206ENST00000457054 MT1MQ8N339 61 aa3.62□□□□□ -1.83
PDCD6IP-206ENST00000457054 LRP2P98164 4655 aa3.61□□□□□ -1.83
PDCD6IP-206ENST00000457054 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
PDCD6IP-206ENST00000457054 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
PDCD6IP-206ENST00000457054 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
PDCD6IP-206ENST00000457054 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
PDCD6IP-206ENST00000457054 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
PDCD6IP-206ENST00000457054 LCE2AQ5TA79 106 aaPredicted RBP3.56□□□□□ -1.84
PDCD6IP-206ENST00000457054 KRTAP19-2Q3LHN2 52 aa3.51□□□□□ -1.85
PDCD6IP-206ENST00000457054 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
PDCD6IP-206ENST00000457054 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
PDCD6IP-206ENST00000457054 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
PDCD6IP-206ENST00000457054 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
PDCD6IP-206ENST00000457054 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
PDCD6IP-206ENST00000457054 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
PDCD6IP-206ENST00000457054 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.86
PDCD6IP-206ENST00000457054 FSIP2Q5CZC0 6907 aa3.43□□□□□ -1.86
PDCD6IP-206ENST00000457054 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
PDCD6IP-206ENST00000457054 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
PDCD6IP-206ENST00000457054 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
PDCD6IP-206ENST00000457054 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
PDCD6IP-206ENST00000457054 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
PDCD6IP-206ENST00000457054 MUC2Q02817 5179 aa3.35□□□□□ -1.87
PDCD6IP-206ENST00000457054 MT1AP04731 61 aa3.34□□□□□ -1.87
PDCD6IP-206ENST00000457054 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
PDCD6IP-206ENST00000457054 PRM1P04553 51 aa3.31□□□□□ -1.88
PDCD6IP-206ENST00000457054 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
PDCD6IP-206ENST00000457054 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
PDCD6IP-206ENST00000457054 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
PDCD6IP-206ENST00000457054 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
PDCD6IP-206ENST00000457054 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
PDCD6IP-206ENST00000457054 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
PDCD6IP-206ENST00000457054 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.9
PDCD6IP-206ENST00000457054 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
PDCD6IP-206ENST00000457054 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.91
PDCD6IP-206ENST00000457054 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
PDCD6IP-206ENST00000457054 NEBP20929 6669 aa3.03□□□□□ -1.92
PDCD6IP-206ENST00000457054 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
PDCD6IP-206ENST00000457054 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
PDCD6IP-206ENST00000457054 KRTAP5-9P26371 169 aa2.77□□□□□ -1.97
PDCD6IP-206ENST00000457054 USH2AO75445 5202 aa2.76□□□□□ -1.97
PDCD6IP-206ENST00000457054 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
PDCD6IP-206ENST00000457054 KMT2DO14686 5537 aa2.75□□□□□ -1.97
PDCD6IP-206ENST00000457054 DSTQ03001 7570 aaKnown RBP2.74□□□□□ -1.97
PDCD6IP-206ENST00000457054 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
PDCD6IP-206ENST00000457054 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
PDCD6IP-206ENST00000457054 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
PDCD6IP-206ENST00000457054 MDN1Q9NU22 5596 aa2.65□□□□□ -1.99
PDCD6IP-206ENST00000457054 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
PDCD6IP-206ENST00000457054 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
PDCD6IP-206ENST00000457054 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
PDCD6IP-206ENST00000457054 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
PDCD6IP-206ENST00000457054 FCGBPQ9Y6R7 5405 aaPredicted RBP2.52□□□□□ -2.01
PDCD6IP-206ENST00000457054 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
PDCD6IP-206ENST00000457054 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PDCD6IP-206ENST00000457054 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
PDCD6IP-206ENST00000457054 MUC12Q9UKN1 5478 aa2.36□□□□□ -2.03
PDCD6IP-206ENST00000457054 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
PDCD6IP-206ENST00000457054 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
PDCD6IP-206ENST00000457054 HMCN1Q96RW7 5635 aa2.21□□□□□ -2.06
PDCD6IP-206ENST00000457054 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
PDCD6IP-206ENST00000457054 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
PDCD6IP-206ENST00000457054 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
PDCD6IP-206ENST00000457054 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
PDCD6IP-206ENST00000457054 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
PDCD6IP-206ENST00000457054 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
PDCD6IP-206ENST00000457054 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
PDCD6IP-206ENST00000457054 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
PDCD6IP-206ENST00000457054 KRTAP5-11Q6L8G4 156 aa1.63□□□□□ -2.15
PDCD6IP-206ENST00000457054 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
PDCD6IP-206ENST00000457054 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
PDCD6IP-206ENST00000457054 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
PDCD6IP-206ENST00000457054 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
PDCD6IP-206ENST00000457054 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 57.7 ms