RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
LINC00959-201ENST00000456581 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
LINC00959-201ENST00000456581 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
LINC00959-201ENST00000456581 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
LINC00959-201ENST00000456581 MT1EP04732 61 aa4.34□□□□□ -1.72
LINC00959-201ENST00000456581 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
LINC00959-201ENST00000456581 MACF1Q9UPN3 7388 aaKnown RBP4.3□□□□□ -1.72
LINC00959-201ENST00000456581 MT1LQ93083 61 aa4.3□□□□□ -1.72
LINC00959-201ENST00000456581 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
LINC00959-201ENST00000456581 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
LINC00959-201ENST00000456581 LOC100996750A0A140TA64 210 aa4.21□□□□□ -1.74
LINC00959-201ENST00000456581 KRTAP4-3Q9BYR4 195 aa4.21□□□□□ -1.74
LINC00959-201ENST00000456581 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
LINC00959-201ENST00000456581 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
LINC00959-201ENST00000456581 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
LINC00959-201ENST00000456581 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
LINC00959-201ENST00000456581 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
LINC00959-201ENST00000456581 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
LINC00959-201ENST00000456581 KRTAP19-3Q7Z4W3 81 aa4.09□□□□□ -1.75
LINC00959-201ENST00000456581 MT1GP13640 62 aa4.07□□□□□ -1.76
LINC00959-201ENST00000456581 MT1MQ8N339 61 aa4.07□□□□□ -1.76
LINC00959-201ENST00000456581 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
LINC00959-201ENST00000456581 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
LINC00959-201ENST00000456581 NEBP20929 6669 aa4.01□□□□□ -1.77
LINC00959-201ENST00000456581 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
LINC00959-201ENST00000456581 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
LINC00959-201ENST00000456581 OBSCNQ5VST9 7968 aa3.91□□□□□ -1.78
LINC00959-201ENST00000456581 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
LINC00959-201ENST00000456581 SPRR2EP22531 72 aa3.88□□□□□ -1.79
LINC00959-201ENST00000456581 SPRR2BP35325 72 aa3.88□□□□□ -1.79
LINC00959-201ENST00000456581 SPRR2AP35326 72 aa3.88□□□□□ -1.79
LINC00959-201ENST00000456581 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
LINC00959-201ENST00000456581 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
LINC00959-201ENST00000456581 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
LINC00959-201ENST00000456581 SPRR2DP22532 72 aa3.78□□□□□ -1.8
LINC00959-201ENST00000456581 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
LINC00959-201ENST00000456581 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
LINC00959-201ENST00000456581 MT1AP04731 61 aa3.58□□□□□ -1.84
LINC00959-201ENST00000456581 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
LINC00959-201ENST00000456581 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
LINC00959-201ENST00000456581 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
LINC00959-201ENST00000456581 PRM1P04553 51 aa3.45□□□□□ -1.86
LINC00959-201ENST00000456581 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
LINC00959-201ENST00000456581 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
LINC00959-201ENST00000456581 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.87
LINC00959-201ENST00000456581 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
LINC00959-201ENST00000456581 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
LINC00959-201ENST00000456581 MT4P47944 62 aa3.28□□□□□ -1.88
LINC00959-201ENST00000456581 MT3P25713 68 aa3.24□□□□□ -1.89
LINC00959-201ENST00000456581 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
LINC00959-201ENST00000456581 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
LINC00959-201ENST00000456581 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
LINC00959-201ENST00000456581 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
LINC00959-201ENST00000456581 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
LINC00959-201ENST00000456581 KRTAP5-7Q6L8G8 165 aa3.07□□□□□ -1.92
LINC00959-201ENST00000456581 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
LINC00959-201ENST00000456581 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
LINC00959-201ENST00000456581 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
LINC00959-201ENST00000456581 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
LINC00959-201ENST00000456581 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
LINC00959-201ENST00000456581 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
LINC00959-201ENST00000456581 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
LINC00959-201ENST00000456581 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
LINC00959-201ENST00000456581 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
LINC00959-201ENST00000456581 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
LINC00959-201ENST00000456581 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
LINC00959-201ENST00000456581 LCE1CQ5T751 118 aa2.53□□□□□ -2
LINC00959-201ENST00000456581 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
LINC00959-201ENST00000456581 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
LINC00959-201ENST00000456581 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
LINC00959-201ENST00000456581 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
LINC00959-201ENST00000456581 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
LINC00959-201ENST00000456581 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.04
LINC00959-201ENST00000456581 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
LINC00959-201ENST00000456581 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
LINC00959-201ENST00000456581 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
LINC00959-201ENST00000456581 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
LINC00959-201ENST00000456581 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms