RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 MT1GP13640 62 aa6.52□□□□□ -1.37
PDLIM2-215ENST00000456545 PP632Q6XCG6 107 aa6.51□□□□□ -1.37
PDLIM2-215ENST00000456545 MT1LQ93083 61 aa6.42□□□□□ -1.38
PDLIM2-215ENST00000456545 A6NED7 52 aa6.41□□□□□ -1.38
PDLIM2-215ENST00000456545 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
PDLIM2-215ENST00000456545 MT1MQ8N339 61 aa6.38□□□□□ -1.39
PDLIM2-215ENST00000456545 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
PDLIM2-215ENST00000456545 KRTAP12-3P60328 96 aa6.35□□□□□ -1.39
PDLIM2-215ENST00000456545 RPS28P62857 69 aaKnown RBP6.33□□□□□ -1.4
PDLIM2-215ENST00000456545 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
PDLIM2-215ENST00000456545 KRTAP4-9Q9BYQ8 210 aa6.21□□□□□ -1.42
PDLIM2-215ENST00000456545 CDC42SE1Q9NRR8 79 aa6.19□□□□□ -1.42
PDLIM2-215ENST00000456545 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
PDLIM2-215ENST00000456545 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
PDLIM2-215ENST00000456545 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
PDLIM2-215ENST00000456545 ROMO1P60602 79 aa6.08□□□□□ -1.44
PDLIM2-215ENST00000456545 LCE1DQ5T752 114 aa6.06□□□□□ -1.44
PDLIM2-215ENST00000456545 MT4P47944 62 aa6.05□□□□□ -1.44
PDLIM2-215ENST00000456545 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
PDLIM2-215ENST00000456545 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
PDLIM2-215ENST00000456545 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
PDLIM2-215ENST00000456545 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
PDLIM2-215ENST00000456545 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
PDLIM2-215ENST00000456545 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
PDLIM2-215ENST00000456545 HMCN1Q96RW7 5635 aa5.85□□□□□ -1.47
PDLIM2-215ENST00000456545 LOC100996750A0A140TA64 210 aa5.8□□□□□ -1.48
PDLIM2-215ENST00000456545 KRTAP5-5Q701N2 237 aaPredicted RBP5.77□□□□□ -1.49
PDLIM2-215ENST00000456545 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
PDLIM2-215ENST00000456545 SPRR5A0A1B0GTR4 108 aa5.64□□□□□ -1.51
PDLIM2-215ENST00000456545 KRTAP20-2Q3LI61 65 aa5.64□□□□□ -1.51
PDLIM2-215ENST00000456545 BRK1Q8WUW1 75 aa5.64□□□□□ -1.51
PDLIM2-215ENST00000456545 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
PDLIM2-215ENST00000456545 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
PDLIM2-215ENST00000456545 KRTAP5-10Q6L8G5 202 aa5.51□□□□□ -1.53
PDLIM2-215ENST00000456545 MT1AP04731 61 aa5.48□□□□□ -1.53
PDLIM2-215ENST00000456545 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
PDLIM2-215ENST00000456545 KRTAP9-6A8MVA2 160 aa5.44□□□□□ -1.54
PDLIM2-215ENST00000456545 KRTAP6-1Q3LI64 71 aa5.43□□□□□ -1.54
PDLIM2-215ENST00000456545 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
PDLIM2-215ENST00000456545 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
PDLIM2-215ENST00000456545 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
PDLIM2-215ENST00000456545 KRTAP5-7Q6L8G8 165 aa5.29□□□□□ -1.56
PDLIM2-215ENST00000456545 KRTAP5-2Q701N4 177 aa5.23□□□□□ -1.57
PDLIM2-215ENST00000456545 KRTAP6-2Q3LI66 62 aa5.18□□□□□ -1.58
PDLIM2-215ENST00000456545 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
PDLIM2-215ENST00000456545 MT3P25713 68 aa5.05□□□□□ -1.6
PDLIM2-215ENST00000456545 PRAC1Q96KF2 57 aa5.05□□□□□ -1.6
PDLIM2-215ENST00000456545 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
PDLIM2-215ENST00000456545 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
PDLIM2-215ENST00000456545 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
PDLIM2-215ENST00000456545 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
PDLIM2-215ENST00000456545 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
PDLIM2-215ENST00000456545 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
PDLIM2-215ENST00000456545 AHNAKQ09666 5890 aaKnown RBP4.61□□□□□ -1.67
PDLIM2-215ENST00000456545 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
PDLIM2-215ENST00000456545 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
PDLIM2-215ENST00000456545 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
PDLIM2-215ENST00000456545 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
PDLIM2-215ENST00000456545 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
PDLIM2-215ENST00000456545 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
PDLIM2-215ENST00000456545 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
PDLIM2-215ENST00000456545 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
PDLIM2-215ENST00000456545 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
PDLIM2-215ENST00000456545 KRTAP4-12Q9BQ66 201 aa3.88□□□□□ -1.79
PDLIM2-215ENST00000456545 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
PDLIM2-215ENST00000456545 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
PDLIM2-215ENST00000456545 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
PDLIM2-215ENST00000456545 LCE1FQ5T754 118 aa3.69□□□□□ -1.82
PDLIM2-215ENST00000456545 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
PDLIM2-215ENST00000456545 A0A0A0MQY5 61 aa3.44□□□□□ -1.86
PDLIM2-215ENST00000456545 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PDLIM2-215ENST00000456545 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
PDLIM2-215ENST00000456545 INE1O15225 51 aa3.26□□□□□ -1.89
PDLIM2-215ENST00000456545 H3BS24 57 aa3.18□□□□□ -1.9
PDLIM2-215ENST00000456545 PRM1P04553 51 aa3.11□□□□□ -1.91
PDLIM2-215ENST00000456545 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
PDLIM2-215ENST00000456545 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PDLIM2-215ENST00000456545 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 154.2 ms