RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 PP632Q6XCG6 107 aa8.79□□□□□ -1
MSH2-203ENST00000454849 Q1T7F1 81 aa8.75□□□□□ -1.01
MSH2-203ENST00000454849 V9GYY9 64 aa8.75□□□□□ -1.01
MSH2-203ENST00000454849 KRTAP4-3Q9BYR4 195 aa8.71□□□□□ -1.02
MSH2-203ENST00000454849 KRTAP4-9Q9BYQ8 210 aa8.67□□□□□ -1.02
MSH2-203ENST00000454849 K7ERS5 55 aa8.65□□□□□ -1.02
MSH2-203ENST00000454849 KRTAP12-3P60328 96 aa8.65□□□□□ -1.02
MSH2-203ENST00000454849 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
MSH2-203ENST00000454849 KRTAP4-7Q9BYR0 210 aa8.55□□□□□ -1.04
MSH2-203ENST00000454849 A6NED7 52 aa8.53□□□□□ -1.04
MSH2-203ENST00000454849 PCP4P48539 62 aa8.44□□□□□ -1.06
MSH2-203ENST00000454849 LCE1DQ5T752 114 aa8.42□□□□□ -1.06
MSH2-203ENST00000454849 MT4P47944 62 aa8.4□□□□□ -1.06
MSH2-203ENST00000454849 LCE4AQ5TA78 99 aa8.36□□□□□ -1.07
MSH2-203ENST00000454849 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
MSH2-203ENST00000454849 KRTAP5-4Q6L8H1 288 aa8.25□□□□□ -1.09
MSH2-203ENST00000454849 CDC42SE1Q9NRR8 79 aa8.23□□□□□ -1.09
MSH2-203ENST00000454849 HMCN1Q96RW7 5635 aa8.21□□□□□ -1.09
MSH2-203ENST00000454849 GPR98Q8WXG9 6306 aa8.19□□□□□ -1.1
MSH2-203ENST00000454849 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
MSH2-203ENST00000454849 KRTAP4-6Q9BYQ5 205 aa8.16□□□□□ -1.1
MSH2-203ENST00000454849 ROMO1P60602 79 aa8.13□□□□□ -1.11
MSH2-203ENST00000454849 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
MSH2-203ENST00000454849 LOC100996750A0A140TA64 210 aa8.09□□□□□ -1.11
MSH2-203ENST00000454849 KRTAP5-5Q701N2 237 aaPredicted RBP8.01□□□□□ -1.13
MSH2-203ENST00000454849 LCE3CQ5T5A8 94 aa7.98□□□□□ -1.13
MSH2-203ENST00000454849 KRTAP19-4Q3LI73 84 aa7.96□□□□□ -1.14
MSH2-203ENST00000454849 AHNAK2Q8IVF2 5795 aa7.88□□□□□ -1.15
MSH2-203ENST00000454849 KRTAP20-2Q3LI61 65 aa7.82□□□□□ -1.16
MSH2-203ENST00000454849 KRTAP12-4P60329 112 aa7.78□□□□□ -1.16
MSH2-203ENST00000454849 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
MSH2-203ENST00000454849 KRTAP5-10Q6L8G5 202 aa7.7□□□□□ -1.18
MSH2-203ENST00000454849 SYNE1Q8NF91 8797 aaKnown RBP7.61□□□□□ -1.19
MSH2-203ENST00000454849 KRTAP9-6A8MVA2 160 aa7.59□□□□□ -1.19
MSH2-203ENST00000454849 KRTAP5-3Q6L8H2 238 aa7.58□□□□□ -1.2
MSH2-203ENST00000454849 KRTAP6-1Q3LI64 71 aa7.53□□□□□ -1.2
MSH2-203ENST00000454849 MT1AP04731 61 aa7.51□□□□□ -1.21
MSH2-203ENST00000454849 BRK1Q8WUW1 75 aa7.45□□□□□ -1.22
MSH2-203ENST00000454849 KRTAP5-7Q6L8G8 165 aa7.36□□□□□ -1.23
MSH2-203ENST00000454849 KRTAP9-4Q9BYQ2 154 aa7.27□□□□□ -1.25
MSH2-203ENST00000454849 KRTAP5-2Q701N4 177 aa7.25□□□□□ -1.25
MSH2-203ENST00000454849 KRTAP6-2Q3LI66 62 aa7.17□□□□□ -1.26
MSH2-203ENST00000454849 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
MSH2-203ENST00000454849 PMAIP1Q13794 54 aa6.98□□□□□ -1.29
MSH2-203ENST00000454849 KRTAP5-8O75690 187 aa6.86□□□□□ -1.31
MSH2-203ENST00000454849 MT3P25713 68 aa6.86□□□□□ -1.31
MSH2-203ENST00000454849 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
MSH2-203ENST00000454849 OBSCNQ5VST9 7968 aa6.75□□□□□ -1.33
MSH2-203ENST00000454849 KRTAP5-1Q6L8H4 278 aa6.5□□□□□ -1.37
MSH2-203ENST00000454849 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
MSH2-203ENST00000454849 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
MSH2-203ENST00000454849 MUC5BQ9HC84 5762 aaPredicted RBP6.44□□□□□ -1.38
MSH2-203ENST00000454849 AHNAKQ09666 5890 aaKnown RBP6.42□□□□□ -1.38
MSH2-203ENST00000454849 MUC5ACP98088 5654 aa6.4□□□□□ -1.39
MSH2-203ENST00000454849 LCE1EQ5T753 118 aa6.2□□□□□ -1.42
MSH2-203ENST00000454849 KTN1-AS1Q86SY8 53 aa6.17□□□□□ -1.42
MSH2-203ENST00000454849 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
MSH2-203ENST00000454849 LCE1BQ5T7P3 118 aa6□□□□□ -1.45
MSH2-203ENST00000454849 KRTAP4-2Q9BYR5 136 aa5.93□□□□□ -1.46
MSH2-203ENST00000454849 LCE1CQ5T751 118 aa5.78□□□□□ -1.48
MSH2-203ENST00000454849 LCE3DQ9BYE3 92 aa5.77□□□□□ -1.49
MSH2-203ENST00000454849 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
MSH2-203ENST00000454849 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
MSH2-203ENST00000454849 LCE3EQ5T5B0 92 aa5.44□□□□□ -1.54
MSH2-203ENST00000454849 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
MSH2-203ENST00000454849 KRTAP5-11Q6L8G4 156 aa5.21□□□□□ -1.58
MSH2-203ENST00000454849 LCE1FQ5T754 118 aa4.99□□□□□ -1.61
MSH2-203ENST00000454849 KRTAP21-2Q3LI59 83 aa4.93□□□□□ -1.62
MSH2-203ENST00000454849 H3BS24 57 aa4.66□□□□□ -1.66
MSH2-203ENST00000454849 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
MSH2-203ENST00000454849 KRTAP4-4Q9BYR3 166 aa4.62□□□□□ -1.67
MSH2-203ENST00000454849 PHGR1C9JFL3 82 aa4.52□□□□□ -1.69
MSH2-203ENST00000454849 PRM1P04553 51 aa4.21□□□□□ -1.74
MSH2-203ENST00000454849 MUC19Q7Z5P9 8384 aa4.14□□□□□ -1.75
MSH2-203ENST00000454849 INE1O15225 51 aa3.58□□□□□ -1.84
MSH2-203ENST00000454849 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
MSH2-203ENST00000454849 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
MSH2-203ENST00000454849 MUC16Q8WXI7 14507 aa2.92□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 5.1 ms