RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
GTF3C2-206ENST00000454704 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
GTF3C2-206ENST00000454704 KRTAP4-6Q9BYQ5 205 aa4.11□□□□□ -1.75
GTF3C2-206ENST00000454704 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
GTF3C2-206ENST00000454704 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
GTF3C2-206ENST00000454704 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
GTF3C2-206ENST00000454704 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
GTF3C2-206ENST00000454704 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
GTF3C2-206ENST00000454704 INE1O15225 51 aa3.98□□□□□ -1.77
GTF3C2-206ENST00000454704 SPRR2EP22531 72 aa3.98□□□□□ -1.77
GTF3C2-206ENST00000454704 SPRR2BP35325 72 aa3.98□□□□□ -1.77
GTF3C2-206ENST00000454704 SPRR2AP35326 72 aa3.98□□□□□ -1.77
GTF3C2-206ENST00000454704 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
GTF3C2-206ENST00000454704 LCE1AQ5T7P2 110 aa3.89□□□□□ -1.79
GTF3C2-206ENST00000454704 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
GTF3C2-206ENST00000454704 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
GTF3C2-206ENST00000454704 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
GTF3C2-206ENST00000454704 SPRR2DP22532 72 aa3.86□□□□□ -1.79
GTF3C2-206ENST00000454704 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
GTF3C2-206ENST00000454704 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
GTF3C2-206ENST00000454704 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
GTF3C2-206ENST00000454704 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
GTF3C2-206ENST00000454704 KRTAP19-7Q3SYF9 63 aa3.74□□□□□ -1.81
GTF3C2-206ENST00000454704 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
GTF3C2-206ENST00000454704 MT1EP04732 61 aa3.67□□□□□ -1.82
GTF3C2-206ENST00000454704 MT1LQ93083 61 aa3.66□□□□□ -1.82
GTF3C2-206ENST00000454704 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
GTF3C2-206ENST00000454704 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
GTF3C2-206ENST00000454704 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
GTF3C2-206ENST00000454704 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
GTF3C2-206ENST00000454704 KRTAP4-7Q9BYR0 210 aa3.5□□□□□ -1.85
GTF3C2-206ENST00000454704 MT1GP13640 62 aa3.49□□□□□ -1.85
GTF3C2-206ENST00000454704 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
GTF3C2-206ENST00000454704 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
GTF3C2-206ENST00000454704 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
GTF3C2-206ENST00000454704 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
GTF3C2-206ENST00000454704 KRTAP9-9Q9BYP9 154 aa3.44□□□□□ -1.86
GTF3C2-206ENST00000454704 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
GTF3C2-206ENST00000454704 MT1MQ8N339 61 aa3.43□□□□□ -1.86
GTF3C2-206ENST00000454704 MT4P47944 62 aa3.4□□□□□ -1.87
GTF3C2-206ENST00000454704 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
GTF3C2-206ENST00000454704 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
GTF3C2-206ENST00000454704 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
GTF3C2-206ENST00000454704 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
GTF3C2-206ENST00000454704 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
GTF3C2-206ENST00000454704 MT1AP04731 61 aa3.19□□□□□ -1.9
GTF3C2-206ENST00000454704 KRTAP5-3Q6L8H2 238 aa3.19□□□□□ -1.9
GTF3C2-206ENST00000454704 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
GTF3C2-206ENST00000454704 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
GTF3C2-206ENST00000454704 KRTAP20-2Q3LI61 65 aa3.11□□□□□ -1.91
GTF3C2-206ENST00000454704 KRTAP4-11Q9BYQ6 195 aa3.08□□□□□ -1.92
GTF3C2-206ENST00000454704 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
GTF3C2-206ENST00000454704 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
GTF3C2-206ENST00000454704 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
GTF3C2-206ENST00000454704 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
GTF3C2-206ENST00000454704 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
GTF3C2-206ENST00000454704 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
GTF3C2-206ENST00000454704 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
GTF3C2-206ENST00000454704 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
GTF3C2-206ENST00000454704 MT3P25713 68 aa2.84□□□□□ -1.96
GTF3C2-206ENST00000454704 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
GTF3C2-206ENST00000454704 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
GTF3C2-206ENST00000454704 PRM1P04553 51 aa2.76□□□□□ -1.97
GTF3C2-206ENST00000454704 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
GTF3C2-206ENST00000454704 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
GTF3C2-206ENST00000454704 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
GTF3C2-206ENST00000454704 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
GTF3C2-206ENST00000454704 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
GTF3C2-206ENST00000454704 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
GTF3C2-206ENST00000454704 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
GTF3C2-206ENST00000454704 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
GTF3C2-206ENST00000454704 LCE1FQ5T754 118 aa2□□□□□ -2.09
GTF3C2-206ENST00000454704 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
GTF3C2-206ENST00000454704 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
GTF3C2-206ENST00000454704 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
GTF3C2-206ENST00000454704 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
GTF3C2-206ENST00000454704 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.13
GTF3C2-206ENST00000454704 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 244.7 ms