RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
MECP2-205ENST00000453960 KRTAP6-3Q3LI67 103 aa6.53□□□□□ -1.36
MECP2-205ENST00000453960 MT1EP04732 61 aa6.45□□□□□ -1.38
MECP2-205ENST00000453960 NEBP20929 6669 aa6.43□□□□□ -1.38
MECP2-205ENST00000453960 MUC12Q9UKN1 5478 aa6.42□□□□□ -1.38
MECP2-205ENST00000453960 MT1LQ93083 61 aa6.39□□□□□ -1.39
MECP2-205ENST00000453960 KRTAP9-6A8MVA2 160 aa6.33□□□□□ -1.4
MECP2-205ENST00000453960 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
MECP2-205ENST00000453960 KRTAP20-1Q3LI63 56 aa6.22□□□□□ -1.41
MECP2-205ENST00000453960 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
MECP2-205ENST00000453960 KRTAP5-9P26371 169 aa6.12□□□□□ -1.43
MECP2-205ENST00000453960 INE1O15225 51 aa6.11□□□□□ -1.43
MECP2-205ENST00000453960 KRTAP2-3P0C7H8 128 aa6.1□□□□□ -1.43
MECP2-205ENST00000453960 KRTAP2-4Q9BYR9 128 aa6.1□□□□□ -1.43
MECP2-205ENST00000453960 KRTAP2-1Q9BYU5 128 aa6.1□□□□□ -1.43
MECP2-205ENST00000453960 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
MECP2-205ENST00000453960 MT1GP13640 62 aa6.06□□□□□ -1.44
MECP2-205ENST00000453960 MT1MQ8N339 61 aa6.03□□□□□ -1.44
MECP2-205ENST00000453960 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
MECP2-205ENST00000453960 KRTAP4-3Q9BYR4 195 aa5.92□□□□□ -1.46
MECP2-205ENST00000453960 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
MECP2-205ENST00000453960 SPRR2EP22531 72 aa5.9□□□□□ -1.47
MECP2-205ENST00000453960 SPRR2BP35325 72 aa5.9□□□□□ -1.47
MECP2-205ENST00000453960 SPRR2AP35326 72 aa5.9□□□□□ -1.47
MECP2-205ENST00000453960 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
MECP2-205ENST00000453960 LCE1AQ5T7P2 110 aa5.77□□□□□ -1.49
MECP2-205ENST00000453960 KRTAP2-2Q9BYT5 123 aa5.73□□□□□ -1.49
MECP2-205ENST00000453960 SPRR2DP22532 72 aa5.69□□□□□ -1.5
MECP2-205ENST00000453960 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
MECP2-205ENST00000453960 LCE3BQ5TA77 95 aa5.56□□□□□ -1.52
MECP2-205ENST00000453960 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
MECP2-205ENST00000453960 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
MECP2-205ENST00000453960 GPR98Q8WXG9 6306 aa5.44□□□□□ -1.54
MECP2-205ENST00000453960 MT1AP04731 61 aa5.43□□□□□ -1.54
MECP2-205ENST00000453960 KRTAP6-1Q3LI64 71 aa5.38□□□□□ -1.55
MECP2-205ENST00000453960 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
MECP2-205ENST00000453960 KRTAP4-12Q9BQ66 201 aa5.23□□□□□ -1.57
MECP2-205ENST00000453960 KRTAP12-4P60329 112 aa5.2□□□□□ -1.58
MECP2-205ENST00000453960 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
MECP2-205ENST00000453960 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
MECP2-205ENST00000453960 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
MECP2-205ENST00000453960 HMCN1Q96RW7 5635 aa5.08□□□□□ -1.6
MECP2-205ENST00000453960 MT4P47944 62 aa5.05□□□□□ -1.6
MECP2-205ENST00000453960 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
MECP2-205ENST00000453960 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
MECP2-205ENST00000453960 KRTAP9-9Q9BYP9 154 aa4.97□□□□□ -1.61
MECP2-205ENST00000453960 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
MECP2-205ENST00000453960 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
MECP2-205ENST00000453960 KRTAP5-4Q6L8H1 288 aa4.94□□□□□ -1.62
MECP2-205ENST00000453960 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
MECP2-205ENST00000453960 MT3P25713 68 aa4.86□□□□□ -1.63
MECP2-205ENST00000453960 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
MECP2-205ENST00000453960 KRTAP5-7Q6L8G8 165 aa4.72□□□□□ -1.65
MECP2-205ENST00000453960 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
MECP2-205ENST00000453960 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
MECP2-205ENST00000453960 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
MECP2-205ENST00000453960 PRM1P04553 51 aa4.55□□□□□ -1.68
MECP2-205ENST00000453960 KRTAP4-11Q9BYQ6 195 aa4.49□□□□□ -1.69
MECP2-205ENST00000453960 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
MECP2-205ENST00000453960 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
MECP2-205ENST00000453960 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
MECP2-205ENST00000453960 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
MECP2-205ENST00000453960 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
MECP2-205ENST00000453960 AHNAKQ09666 5890 aaKnown RBP4.15□□□□□ -1.75
MECP2-205ENST00000453960 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
MECP2-205ENST00000453960 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
MECP2-205ENST00000453960 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
MECP2-205ENST00000453960 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
MECP2-205ENST00000453960 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
MECP2-205ENST00000453960 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
MECP2-205ENST00000453960 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
MECP2-205ENST00000453960 KRTAP5-11Q6L8G4 156 aa3.37□□□□□ -1.87
MECP2-205ENST00000453960 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
MECP2-205ENST00000453960 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
MECP2-205ENST00000453960 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
MECP2-205ENST00000453960 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
MECP2-205ENST00000453960 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 58.3 ms