RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 SEC61GP60059 68 aa7.63□□□□□ -1.19
HMG20B-206ENST00000453933 SPATA8Q6RVD6 105 aa7.63□□□□□ -1.19
HMG20B-206ENST00000453933 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
HMG20B-206ENST00000453933 SPRR5A0A1B0GTR4 108 aa7.52□□□□□ -1.21
HMG20B-206ENST00000453933 A0A1B0GU33 70 aa7.52□□□□□ -1.21
HMG20B-206ENST00000453933 A0A1B0GU69 56 aa7.52□□□□□ -1.21
HMG20B-206ENST00000453933 RPS28P62857 69 aaKnown RBP7.52□□□□□ -1.21
HMG20B-206ENST00000453933 PRR15LQ9BU68 103 aa7.49□□□□□ -1.21
HMG20B-206ENST00000453933 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
HMG20B-206ENST00000453933 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
HMG20B-206ENST00000453933 SMIM26A0A096LP01 95 aa7.46□□□□□ -1.22
HMG20B-206ENST00000453933 V9GYY9 64 aa7.45□□□□□ -1.22
HMG20B-206ENST00000453933 KRTAP20-2Q3LI61 65 aa7.44□□□□□ -1.22
HMG20B-206ENST00000453933 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
HMG20B-206ENST00000453933 Q1T7F1 81 aa7.39□□□□□ -1.23
HMG20B-206ENST00000453933 TNP1P09430 55 aa7.34□□□□□ -1.23
HMG20B-206ENST00000453933 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
HMG20B-206ENST00000453933 A8MU10 97 aa7.25□□□□□ -1.25
HMG20B-206ENST00000453933 PSPHP1O15172 72 aa7.25□□□□□ -1.25
HMG20B-206ENST00000453933 UQCR11O14957 56 aa7.23□□□□□ -1.25
HMG20B-206ENST00000453933 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
HMG20B-206ENST00000453933 KRTAP12-4P60329 112 aa7.17□□□□□ -1.26
HMG20B-206ENST00000453933 KRTAP12-3P60328 96 aa7.14□□□□□ -1.27
HMG20B-206ENST00000453933 MIR22HGQ0VDD5 57 aa7.1□□□□□ -1.27
HMG20B-206ENST00000453933 SYNE1Q8NF91 8797 aaKnown RBP7.09□□□□□ -1.27
HMG20B-206ENST00000453933 A6NED7 52 aa7.07□□□□□ -1.28
HMG20B-206ENST00000453933 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
HMG20B-206ENST00000453933 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
HMG20B-206ENST00000453933 K7ERS5 55 aa6.91□□□□□ -1.3
HMG20B-206ENST00000453933 CDC42SE1Q9NRR8 79 aa6.9□□□□□ -1.3
HMG20B-206ENST00000453933 AHNAKQ09666 5890 aaKnown RBP6.86□□□□□ -1.31
HMG20B-206ENST00000453933 MUC5ACP98088 5654 aa6.83□□□□□ -1.32
HMG20B-206ENST00000453933 KRTAP5-8O75690 187 aa6.76□□□□□ -1.33
HMG20B-206ENST00000453933 KRTAP5-2Q701N4 177 aa6.74□□□□□ -1.33
HMG20B-206ENST00000453933 MUC5BQ9HC84 5762 aaPredicted RBP6.73□□□□□ -1.33
HMG20B-206ENST00000453933 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
HMG20B-206ENST00000453933 KRTAP25-1Q3LHN0 102 aa6.68□□□□□ -1.34
HMG20B-206ENST00000453933 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
HMG20B-206ENST00000453933 KRTAP6-1Q3LI64 71 aa6.53□□□□□ -1.36
HMG20B-206ENST00000453933 KRTAP15-1Q3LI76 137 aa6.53□□□□□ -1.36
HMG20B-206ENST00000453933 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
HMG20B-206ENST00000453933 ROMO1P60602 79 aa6.51□□□□□ -1.37
HMG20B-206ENST00000453933 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
HMG20B-206ENST00000453933 MT1AP04731 61 aa6.5□□□□□ -1.37
HMG20B-206ENST00000453933 KRTAP9-9Q9BYP9 154 aa6.5□□□□□ -1.37
HMG20B-206ENST00000453933 KRTAP23-1A1A580 65 aa6.38□□□□□ -1.39
HMG20B-206ENST00000453933 KRTAP6-2Q3LI66 62 aa6.38□□□□□ -1.39
HMG20B-206ENST00000453933 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
HMG20B-206ENST00000453933 PRO0628Q9UI54 55 aa6.37□□□□□ -1.39
HMG20B-206ENST00000453933 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
HMG20B-206ENST00000453933 KRTAP5-1Q6L8H4 278 aa6.18□□□□□ -1.42
HMG20B-206ENST00000453933 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
HMG20B-206ENST00000453933 MT3P25713 68 aa5.98□□□□□ -1.45
HMG20B-206ENST00000453933 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
HMG20B-206ENST00000453933 SVIPQ8NHG7 77 aa5.91□□□□□ -1.46
HMG20B-206ENST00000453933 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
HMG20B-206ENST00000453933 LCE1EQ5T753 118 aa5.64□□□□□ -1.51
HMG20B-206ENST00000453933 KRTAP4-2Q9BYR5 136 aa5.43□□□□□ -1.54
HMG20B-206ENST00000453933 LCE1BQ5T7P3 118 aa5.41□□□□□ -1.54
HMG20B-206ENST00000453933 LCE1CQ5T751 118 aa5.24□□□□□ -1.57
HMG20B-206ENST00000453933 KRTAP4-12Q9BQ66 201 aa5.2□□□□□ -1.58
HMG20B-206ENST00000453933 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
HMG20B-206ENST00000453933 KRTAP5-11Q6L8G4 156 aa4.9□□□□□ -1.63
HMG20B-206ENST00000453933 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
HMG20B-206ENST00000453933 PHGR1C9JFL3 82 aa4.72□□□□□ -1.65
HMG20B-206ENST00000453933 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
HMG20B-206ENST00000453933 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
HMG20B-206ENST00000453933 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
HMG20B-206ENST00000453933 KRTAP21-2Q3LI59 83 aa4.32□□□□□ -1.72
HMG20B-206ENST00000453933 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
HMG20B-206ENST00000453933 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
HMG20B-206ENST00000453933 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
HMG20B-206ENST00000453933 H3BS24 57 aa4.04□□□□□ -1.76
HMG20B-206ENST00000453933 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
HMG20B-206ENST00000453933 INE1O15225 51 aa3.79□□□□□ -1.8
HMG20B-206ENST00000453933 KRTAP21-1Q3LI58 79 aa3.57□□□□□ -1.84
HMG20B-206ENST00000453933 PRM1P04553 51 aa3.34□□□□□ -1.87
HMG20B-206ENST00000453933 MUC16Q8WXI7 14507 aa2.8□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 92.2 ms