RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 KRTAP5-4Q6L8H1 288 aa9.38□□□□□ -0.91
USP42-204ENST00000451154 KRTAP4-6Q9BYQ5 205 aa9.31□□□□□ -0.92
USP42-204ENST00000451154 KRTAP4-7Q9BYR0 210 aa9.2□□□□□ -0.94
USP42-204ENST00000451154 KRTAP5-10Q6L8G5 202 aa9.19□□□□□ -0.94
USP42-204ENST00000451154 KRTAP12-3P60328 96 aa9.1□□□□□ -0.95
USP42-204ENST00000451154 PRR15LQ9BU68 103 aa9.04□□□□□ -0.96
USP42-204ENST00000451154 ANAPC13Q9BS18 74 aa9.01□□□□□ -0.97
USP42-204ENST00000451154 KRTAP5-3Q6L8H2 238 aa8.91□□□□□ -0.98
USP42-204ENST00000451154 LINC01558Q9Y6Z2 57 aa8.91□□□□□ -0.98
USP42-204ENST00000451154 CCDC179H3BU77 68 aa8.89□□□□□ -0.99
USP42-204ENST00000451154 KRTAP20-2Q3LI61 65 aa8.89□□□□□ -0.99
USP42-204ENST00000451154 KRTAP5-7Q6L8G8 165 aa8.87□□□□□ -0.99
USP42-204ENST00000451154 KRTAP5-5Q701N2 237 aaPredicted RBP8.87□□□□□ -0.99
USP42-204ENST00000451154 ATP5EP56381 51 aaPredicted RBP8.8□□□□□ -1
USP42-204ENST00000451154 SPRR5A0A1B0GTR4 108 aa8.78□□□□□ -1
USP42-204ENST00000451154 UQCR11O14957 56 aa8.75□□□□□ -1.01
USP42-204ENST00000451154 KRTAP12-4P60329 112 aa8.74□□□□□ -1.01
USP42-204ENST00000451154 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
USP42-204ENST00000451154 KRTAP25-1Q3LHN0 102 aa8.67□□□□□ -1.02
USP42-204ENST00000451154 SYNE1Q8NF91 8797 aaKnown RBP8.63□□□□□ -1.03
USP42-204ENST00000451154 MIR22HGQ0VDD5 57 aa8.54□□□□□ -1.04
USP42-204ENST00000451154 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
USP42-204ENST00000451154 TMEM258P61165 79 aa8.45□□□□□ -1.06
USP42-204ENST00000451154 K7ERS5 55 aa8.41□□□□□ -1.06
USP42-204ENST00000451154 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.06
USP42-204ENST00000451154 LCE3CQ5T5A8 94 aa8.36□□□□□ -1.07
USP42-204ENST00000451154 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
USP42-204ENST00000451154 PSPHP1O15172 72 aa8.21□□□□□ -1.1
USP42-204ENST00000451154 KRTAP4-11Q9BYQ6 195 aa8.21□□□□□ -1.1
USP42-204ENST00000451154 KRTAP6-1Q3LI64 71 aa8.18□□□□□ -1.1
USP42-204ENST00000451154 MT1AP04731 61 aa8.16□□□□□ -1.1
USP42-204ENST00000451154 KRTAP5-2Q701N4 177 aa8.15□□□□□ -1.1
USP42-204ENST00000451154 V9GYY9 64 aa8.09□□□□□ -1.11
USP42-204ENST00000451154 Q1T7F1 81 aa8.04□□□□□ -1.12
USP42-204ENST00000451154 KRTAP9-4Q9BYQ2 154 aa7.96□□□□□ -1.14
USP42-204ENST00000451154 KRTAP9-6A8MVA2 160 aa7.93□□□□□ -1.14
USP42-204ENST00000451154 KRTAP5-8O75690 187 aa7.93□□□□□ -1.14
USP42-204ENST00000451154 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
USP42-204ENST00000451154 A6NED7 52 aa7.88□□□□□ -1.15
USP42-204ENST00000451154 KRTAP6-2Q3LI66 62 aa7.88□□□□□ -1.15
USP42-204ENST00000451154 RPS28P62857 69 aaKnown RBP7.84□□□□□ -1.15
USP42-204ENST00000451154 OBSCNQ5VST9 7968 aa7.84□□□□□ -1.15
USP42-204ENST00000451154 AHNAKQ09666 5890 aaKnown RBP7.83□□□□□ -1.16
USP42-204ENST00000451154 MUC5BQ9HC84 5762 aaPredicted RBP7.8□□□□□ -1.16
USP42-204ENST00000451154 ROMO1P60602 79 aa7.8□□□□□ -1.16
USP42-204ENST00000451154 MUC5ACP98088 5654 aa7.74□□□□□ -1.17
USP42-204ENST00000451154 KRTAP9-9Q9BYP9 154 aa7.58□□□□□ -1.2
USP42-204ENST00000451154 MT3P25713 68 aa7.49□□□□□ -1.21
USP42-204ENST00000451154 KRTAP5-1Q6L8H4 278 aa7.4□□□□□ -1.22
USP42-204ENST00000451154 H3BS24 57 aa7.23□□□□□ -1.25
USP42-204ENST00000451154 LCE1EQ5T753 118 aa6.93□□□□□ -1.3
USP42-204ENST00000451154 PCP4P48539 62 aa6.74□□□□□ -1.33
USP42-204ENST00000451154 LCE1BQ5T7P3 118 aa6.62□□□□□ -1.35
USP42-204ENST00000451154 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
USP42-204ENST00000451154 KRTAP4-2Q9BYR5 136 aa6.61□□□□□ -1.35
USP42-204ENST00000451154 LCE1CQ5T751 118 aa6.44□□□□□ -1.38
USP42-204ENST00000451154 BRK1Q8WUW1 75 aa6.3□□□□□ -1.4
USP42-204ENST00000451154 KRTAP4-12Q9BQ66 201 aa6.17□□□□□ -1.42
USP42-204ENST00000451154 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.46
USP42-204ENST00000451154 PMAIP1Q13794 54 aa5.9□□□□□ -1.46
USP42-204ENST00000451154 KRTAP5-11Q6L8G4 156 aa5.85□□□□□ -1.47
USP42-204ENST00000451154 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
USP42-204ENST00000451154 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.8□□□□□ -1.48
USP42-204ENST00000451154 LCE1FQ5T754 118 aa5.76□□□□□ -1.49
USP42-204ENST00000451154 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
USP42-204ENST00000451154 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
USP42-204ENST00000451154 KRTAP21-2Q3LI59 83 aa5.38□□□□□ -1.55
USP42-204ENST00000451154 PHGR1C9JFL3 82 aa5.37□□□□□ -1.55
USP42-204ENST00000451154 KRTAP4-4Q9BYR3 166 aa5.04□□□□□ -1.6
USP42-204ENST00000451154 PRO0628Q9UI54 55 aa5□□□□□ -1.61
USP42-204ENST00000451154 LUZP6Q538Z0 58 aa4.96□□□□□ -1.62
USP42-204ENST00000451154 KTN1-AS1Q86SY8 53 aa4.91□□□□□ -1.62
USP42-204ENST00000451154 MUC19Q7Z5P9 8384 aa4.83□□□□□ -1.64
USP42-204ENST00000451154 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
USP42-204ENST00000451154 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
USP42-204ENST00000451154 PRM1P04553 51 aa3.99□□□□□ -1.77
USP42-204ENST00000451154 MUC16Q8WXI7 14507 aa3.37□□□□□ -1.87
USP42-204ENST00000451154 INE1O15225 51 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 253.6 ms