RNA–Protein interactions for RNA: ENST00000450894.7

ITGB4-203, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-203ENST00000450894 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
ITGB4-203ENST00000450894 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
ITGB4-203ENST00000450894 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
ITGB4-203ENST00000450894 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
ITGB4-203ENST00000450894 KRTAP19-6Q3LI70 58 aa4.12□□□□□ -1.75
ITGB4-203ENST00000450894 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
ITGB4-203ENST00000450894 MT1AP04731 61 aa4.11□□□□□ -1.75
ITGB4-203ENST00000450894 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
ITGB4-203ENST00000450894 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
ITGB4-203ENST00000450894 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
ITGB4-203ENST00000450894 MT4P47944 62 aa3.99□□□□□ -1.77
ITGB4-203ENST00000450894 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
ITGB4-203ENST00000450894 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
ITGB4-203ENST00000450894 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
ITGB4-203ENST00000450894 KRTAP4-9Q9BYQ8 210 aa3.96□□□□□ -1.78
ITGB4-203ENST00000450894 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
ITGB4-203ENST00000450894 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
ITGB4-203ENST00000450894 MUC2Q02817 5179 aa3.91□□□□□ -1.78
ITGB4-203ENST00000450894 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
ITGB4-203ENST00000450894 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
ITGB4-203ENST00000450894 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
ITGB4-203ENST00000450894 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
ITGB4-203ENST00000450894 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
ITGB4-203ENST00000450894 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
ITGB4-203ENST00000450894 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
ITGB4-203ENST00000450894 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
ITGB4-203ENST00000450894 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
ITGB4-203ENST00000450894 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
ITGB4-203ENST00000450894 KRTAP9-4Q9BYQ2 154 aa3.74□□□□□ -1.81
ITGB4-203ENST00000450894 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
ITGB4-203ENST00000450894 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
ITGB4-203ENST00000450894 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
ITGB4-203ENST00000450894 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
ITGB4-203ENST00000450894 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
ITGB4-203ENST00000450894 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
ITGB4-203ENST00000450894 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
ITGB4-203ENST00000450894 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
ITGB4-203ENST00000450894 KMT2DO14686 5537 aa3.48□□□□□ -1.85
ITGB4-203ENST00000450894 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
ITGB4-203ENST00000450894 USH2AO75445 5202 aa3.42□□□□□ -1.86
ITGB4-203ENST00000450894 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ITGB4-203ENST00000450894 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
ITGB4-203ENST00000450894 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
ITGB4-203ENST00000450894 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
ITGB4-203ENST00000450894 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
ITGB4-203ENST00000450894 MUC12Q9UKN1 5478 aa3.16□□□□□ -1.9
ITGB4-203ENST00000450894 NEBP20929 6669 aa3.11□□□□□ -1.91
ITGB4-203ENST00000450894 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
ITGB4-203ENST00000450894 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
ITGB4-203ENST00000450894 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
ITGB4-203ENST00000450894 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
ITGB4-203ENST00000450894 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
ITGB4-203ENST00000450894 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
ITGB4-203ENST00000450894 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
ITGB4-203ENST00000450894 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
ITGB4-203ENST00000450894 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
ITGB4-203ENST00000450894 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
ITGB4-203ENST00000450894 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
ITGB4-203ENST00000450894 KRTAP4-12Q9BQ66 201 aa2.64□□□□□ -1.99
ITGB4-203ENST00000450894 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
ITGB4-203ENST00000450894 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
ITGB4-203ENST00000450894 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
ITGB4-203ENST00000450894 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
ITGB4-203ENST00000450894 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
ITGB4-203ENST00000450894 HMCN1Q96RW7 5635 aa2.25□□□□□ -2.05
ITGB4-203ENST00000450894 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
ITGB4-203ENST00000450894 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
ITGB4-203ENST00000450894 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
ITGB4-203ENST00000450894 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
ITGB4-203ENST00000450894 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
ITGB4-203ENST00000450894 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
ITGB4-203ENST00000450894 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
ITGB4-203ENST00000450894 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
ITGB4-203ENST00000450894 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
ITGB4-203ENST00000450894 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
ITGB4-203ENST00000450894 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
ITGB4-203ENST00000450894 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 65.7 ms