RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
ITGB4-202ENST00000449880 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
ITGB4-202ENST00000449880 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 KRTAP2-1Q9BYU5 128 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 MT3P25713 68 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
ITGB4-202ENST00000449880 MUC2Q02817 5179 aa4.3□□□□□ -1.72
ITGB4-202ENST00000449880 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
ITGB4-202ENST00000449880 PRM1P04553 51 aa4.3□□□□□ -1.72
ITGB4-202ENST00000449880 MT1MQ8N339 61 aa4.29□□□□□ -1.72
ITGB4-202ENST00000449880 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
ITGB4-202ENST00000449880 MT4P47944 62 aa4.21□□□□□ -1.74
ITGB4-202ENST00000449880 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
ITGB4-202ENST00000449880 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
ITGB4-202ENST00000449880 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.75
ITGB4-202ENST00000449880 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
ITGB4-202ENST00000449880 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
ITGB4-202ENST00000449880 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
ITGB4-202ENST00000449880 MT1AP04731 61 aa4.06□□□□□ -1.76
ITGB4-202ENST00000449880 KRTAP20-1Q3LI63 56 aa4.01□□□□□ -1.77
ITGB4-202ENST00000449880 KRTAP9-7A8MTY7 169 aa3.98□□□□□ -1.77
ITGB4-202ENST00000449880 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
ITGB4-202ENST00000449880 LCE5AQ5TCM9 118 aa3.88□□□□□ -1.79
ITGB4-202ENST00000449880 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
ITGB4-202ENST00000449880 USH2AO75445 5202 aa3.85□□□□□ -1.79
ITGB4-202ENST00000449880 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
ITGB4-202ENST00000449880 KRTAP4-9Q9BYQ8 210 aa3.8□□□□□ -1.8
ITGB4-202ENST00000449880 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
ITGB4-202ENST00000449880 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
ITGB4-202ENST00000449880 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
ITGB4-202ENST00000449880 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
ITGB4-202ENST00000449880 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
ITGB4-202ENST00000449880 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
ITGB4-202ENST00000449880 KRTAP9-4Q9BYQ2 154 aa3.69□□□□□ -1.82
ITGB4-202ENST00000449880 KMT2DO14686 5537 aa3.69□□□□□ -1.82
ITGB4-202ENST00000449880 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
ITGB4-202ENST00000449880 LCE1CQ5T751 118 aa3.54□□□□□ -1.84
ITGB4-202ENST00000449880 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
ITGB4-202ENST00000449880 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
ITGB4-202ENST00000449880 SSPOA2VEC9 5147 aa3.5□□□□□ -1.85
ITGB4-202ENST00000449880 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
ITGB4-202ENST00000449880 FCGBPQ9Y6R7 5405 aaPredicted RBP3.48□□□□□ -1.85
ITGB4-202ENST00000449880 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
ITGB4-202ENST00000449880 MUC12Q9UKN1 5478 aa3.35□□□□□ -1.87
ITGB4-202ENST00000449880 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
ITGB4-202ENST00000449880 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
ITGB4-202ENST00000449880 NEBP20929 6669 aa3.2□□□□□ -1.9
ITGB4-202ENST00000449880 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
ITGB4-202ENST00000449880 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
ITGB4-202ENST00000449880 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
ITGB4-202ENST00000449880 KRTAP5-5Q701N2 237 aaPredicted RBP3.08□□□□□ -1.92
ITGB4-202ENST00000449880 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
ITGB4-202ENST00000449880 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
ITGB4-202ENST00000449880 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
ITGB4-202ENST00000449880 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
ITGB4-202ENST00000449880 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
ITGB4-202ENST00000449880 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
ITGB4-202ENST00000449880 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
ITGB4-202ENST00000449880 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
ITGB4-202ENST00000449880 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
ITGB4-202ENST00000449880 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
ITGB4-202ENST00000449880 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
ITGB4-202ENST00000449880 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
ITGB4-202ENST00000449880 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
ITGB4-202ENST00000449880 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
ITGB4-202ENST00000449880 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
ITGB4-202ENST00000449880 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
ITGB4-202ENST00000449880 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
ITGB4-202ENST00000449880 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
ITGB4-202ENST00000449880 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
ITGB4-202ENST00000449880 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
ITGB4-202ENST00000449880 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
ITGB4-202ENST00000449880 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
ITGB4-202ENST00000449880 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.09
ITGB4-202ENST00000449880 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms