RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
PRDM15-208ENST00000449395 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
PRDM15-208ENST00000449395 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
PRDM15-208ENST00000449395 KRTAP2-1Q9BYU5 128 aa3.48□□□□□ -1.85
PRDM15-208ENST00000449395 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
PRDM15-208ENST00000449395 LRP2P98164 4655 aa3.47□□□□□ -1.85
PRDM15-208ENST00000449395 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
PRDM15-208ENST00000449395 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
PRDM15-208ENST00000449395 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
PRDM15-208ENST00000449395 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
PRDM15-208ENST00000449395 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PRDM15-208ENST00000449395 MT1LQ93083 61 aa3.39□□□□□ -1.87
PRDM15-208ENST00000449395 MT1EP04732 61 aa3.36□□□□□ -1.87
PRDM15-208ENST00000449395 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
PRDM15-208ENST00000449395 MUC17Q685J3 4493 aa3.29□□□□□ -1.88
PRDM15-208ENST00000449395 FLGP20930 4061 aaPredicted RBP3.26□□□□□ -1.89
PRDM15-208ENST00000449395 MT1MQ8N339 61 aa3.26□□□□□ -1.89
PRDM15-208ENST00000449395 MT3P25713 68 aa3.25□□□□□ -1.89
PRDM15-208ENST00000449395 ABCA13Q86UQ4 5058 aa3.22□□□□□ -1.89
PRDM15-208ENST00000449395 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
PRDM15-208ENST00000449395 LOC100996750A0A140TA64 210 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 LCE4AQ5TA78 99 aa3.21□□□□□ -1.9
PRDM15-208ENST00000449395 PRM1P04553 51 aa3.17□□□□□ -1.9
PRDM15-208ENST00000449395 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
PRDM15-208ENST00000449395 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
PRDM15-208ENST00000449395 MUC2Q02817 5179 aa3.08□□□□□ -1.92
PRDM15-208ENST00000449395 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
PRDM15-208ENST00000449395 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
PRDM15-208ENST00000449395 MT1AP04731 61 aa3.03□□□□□ -1.92
PRDM15-208ENST00000449395 HMCN2Q8NDA2 5059 aa2.99□□□□□ -1.93
PRDM15-208ENST00000449395 NEBP20929 6669 aa2.92□□□□□ -1.94
PRDM15-208ENST00000449395 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PRDM15-208ENST00000449395 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
PRDM15-208ENST00000449395 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
PRDM15-208ENST00000449395 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
PRDM15-208ENST00000449395 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
PRDM15-208ENST00000449395 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
PRDM15-208ENST00000449395 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
PRDM15-208ENST00000449395 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.97
PRDM15-208ENST00000449395 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
PRDM15-208ENST00000449395 KMT2DO14686 5537 aa2.65□□□□□ -1.99
PRDM15-208ENST00000449395 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
PRDM15-208ENST00000449395 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
PRDM15-208ENST00000449395 SSPOA2VEC9 5147 aa2.61□□□□□ -1.99
PRDM15-208ENST00000449395 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
PRDM15-208ENST00000449395 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
PRDM15-208ENST00000449395 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
PRDM15-208ENST00000449395 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
PRDM15-208ENST00000449395 USH2AO75445 5202 aa2.56□□□□□ -2
PRDM15-208ENST00000449395 KRTAP4-11Q9BYQ6 195 aa2.45□□□□□ -2.02
PRDM15-208ENST00000449395 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
PRDM15-208ENST00000449395 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
PRDM15-208ENST00000449395 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
PRDM15-208ENST00000449395 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
PRDM15-208ENST00000449395 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
PRDM15-208ENST00000449395 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
PRDM15-208ENST00000449395 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
PRDM15-208ENST00000449395 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
PRDM15-208ENST00000449395 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
PRDM15-208ENST00000449395 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
PRDM15-208ENST00000449395 AHNAK2Q8IVF2 5795 aa1.91□□□□□ -2.1
PRDM15-208ENST00000449395 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.11
PRDM15-208ENST00000449395 KRTAP5-10Q6L8G5 202 aa1.82□□□□□ -2.12
PRDM15-208ENST00000449395 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
PRDM15-208ENST00000449395 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
PRDM15-208ENST00000449395 MUC5BQ9HC84 5762 aaPredicted RBP1.64□□□□□ -2.15
PRDM15-208ENST00000449395 KRTAP5-2Q701N4 177 aa1.62□□□□□ -2.15
PRDM15-208ENST00000449395 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
PRDM15-208ENST00000449395 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
PRDM15-208ENST00000449395 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
PRDM15-208ENST00000449395 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
PRDM15-208ENST00000449395 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
PRDM15-208ENST00000449395 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms