RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 Q1T7F1 81 aa5.49□□□□□ -1.53
GTF3C3-206ENST00000448539 PSPHP1O15172 72 aa5.47□□□□□ -1.53
GTF3C3-206ENST00000448539 MIR22HGQ0VDD5 57 aa5.45□□□□□ -1.54
GTF3C3-206ENST00000448539 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
GTF3C3-206ENST00000448539 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
GTF3C3-206ENST00000448539 K7ERS5 55 aa5.36□□□□□ -1.55
GTF3C3-206ENST00000448539 TNP1P09430 55 aa5.34□□□□□ -1.55
GTF3C3-206ENST00000448539 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
GTF3C3-206ENST00000448539 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
GTF3C3-206ENST00000448539 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
GTF3C3-206ENST00000448539 A6NED7 52 aa5.31□□□□□ -1.56
GTF3C3-206ENST00000448539 SPRR2DP22532 72 aa5.31□□□□□ -1.56
GTF3C3-206ENST00000448539 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
GTF3C3-206ENST00000448539 MT1EP04732 61 aa5.19□□□□□ -1.58
GTF3C3-206ENST00000448539 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
GTF3C3-206ENST00000448539 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
GTF3C3-206ENST00000448539 KRTAP25-1Q3LHN0 102 aa5.14□□□□□ -1.59
GTF3C3-206ENST00000448539 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
GTF3C3-206ENST00000448539 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
GTF3C3-206ENST00000448539 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
GTF3C3-206ENST00000448539 MT1GP13640 62 aa5.03□□□□□ -1.6
GTF3C3-206ENST00000448539 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
GTF3C3-206ENST00000448539 KRTAP12-3P60328 96 aa5.01□□□□□ -1.61
GTF3C3-206ENST00000448539 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
GTF3C3-206ENST00000448539 MT1LQ93083 61 aa5□□□□□ -1.61
GTF3C3-206ENST00000448539 ROMO1P60602 79 aa4.98□□□□□ -1.61
GTF3C3-206ENST00000448539 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-206ENST00000448539 MT1MQ8N339 61 aa4.92□□□□□ -1.62
GTF3C3-206ENST00000448539 GPR98Q8WXG9 6306 aa4.83□□□□□ -1.64
GTF3C3-206ENST00000448539 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
GTF3C3-206ENST00000448539 KRTAP4-3Q9BYR4 195 aa4.78□□□□□ -1.64
GTF3C3-206ENST00000448539 HMCN1Q96RW7 5635 aa4.66□□□□□ -1.66
GTF3C3-206ENST00000448539 MT4P47944 62 aa4.66□□□□□ -1.66
GTF3C3-206ENST00000448539 LCE3CQ5T5A8 94 aa4.63□□□□□ -1.67
GTF3C3-206ENST00000448539 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
GTF3C3-206ENST00000448539 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
GTF3C3-206ENST00000448539 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
GTF3C3-206ENST00000448539 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
GTF3C3-206ENST00000448539 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
GTF3C3-206ENST00000448539 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
GTF3C3-206ENST00000448539 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
GTF3C3-206ENST00000448539 MT3P25713 68 aa4.37□□□□□ -1.71
GTF3C3-206ENST00000448539 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
GTF3C3-206ENST00000448539 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
GTF3C3-206ENST00000448539 SPRR5A0A1B0GTR4 108 aa4.31□□□□□ -1.72
GTF3C3-206ENST00000448539 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
GTF3C3-206ENST00000448539 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
GTF3C3-206ENST00000448539 SYNE1Q8NF91 8797 aaKnown RBP4.3□□□□□ -1.72
GTF3C3-206ENST00000448539 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
GTF3C3-206ENST00000448539 MT1AP04731 61 aa4.27□□□□□ -1.73
GTF3C3-206ENST00000448539 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
GTF3C3-206ENST00000448539 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
GTF3C3-206ENST00000448539 KRTAP5-2Q701N4 177 aa4.02□□□□□ -1.77
GTF3C3-206ENST00000448539 LCE1EQ5T753 118 aa4□□□□□ -1.77
GTF3C3-206ENST00000448539 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
GTF3C3-206ENST00000448539 KRTAP5-11Q6L8G4 156 aa3.9□□□□□ -1.79
GTF3C3-206ENST00000448539 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
GTF3C3-206ENST00000448539 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
GTF3C3-206ENST00000448539 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
GTF3C3-206ENST00000448539 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
GTF3C3-206ENST00000448539 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
GTF3C3-206ENST00000448539 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
GTF3C3-206ENST00000448539 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
GTF3C3-206ENST00000448539 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
GTF3C3-206ENST00000448539 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
GTF3C3-206ENST00000448539 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
GTF3C3-206ENST00000448539 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.87
GTF3C3-206ENST00000448539 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
GTF3C3-206ENST00000448539 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
GTF3C3-206ENST00000448539 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
GTF3C3-206ENST00000448539 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
GTF3C3-206ENST00000448539 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
GTF3C3-206ENST00000448539 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
GTF3C3-206ENST00000448539 INE1O15225 51 aa2.55□□□□□ -2
GTF3C3-206ENST00000448539 PRM1P04553 51 aa2.55□□□□□ -2
GTF3C3-206ENST00000448539 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
GTF3C3-206ENST00000448539 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
GTF3C3-206ENST00000448539 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 68.1 ms