RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DMAC1Q96GE9 116 aa0.73□□□□□ -2.29
PMS1-215ENST00000447232 ATOX1O00244 68 aa0.73□□□□□ -2.29
PMS1-215ENST00000447232 VAMP8Q9BV40 100 aa0.73□□□□□ -2.29
PMS1-215ENST00000447232 SPCS1Q9Y6A9 102 aa0.72□□□□□ -2.29
PMS1-215ENST00000447232 V9GYY9 64 aa0.72□□□□□ -2.29
PMS1-215ENST00000447232 H0Y9P7 68 aa0.72□□□□□ -2.29
PMS1-215ENST00000447232 KRTAP12-1P59990 96 aa0.72□□□□□ -2.29
PMS1-215ENST00000447232 SCGB1A1P11684 91 aa0.71□□□□□ -2.3
PMS1-215ENST00000447232 SPINT4Q6UDR6 99 aa0.71□□□□□ -2.3
PMS1-215ENST00000447232 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
PMS1-215ENST00000447232 LINC00208Q96KT6 92 aa0.7□□□□□ -2.3
PMS1-215ENST00000447232 LOC105371267A0A1B0GV96 52 aa0.7□□□□□ -2.3
PMS1-215ENST00000447232 UQCRQO14949 82 aa0.7□□□□□ -2.3
PMS1-215ENST00000447232 TRAV7A0A075B6U4 112 aa0.69□□□□□ -2.3
PMS1-215ENST00000447232 S100A1P23297 94 aa0.69□□□□□ -2.3
PMS1-215ENST00000447232 HSD52Q0P140 79 aa0.69□□□□□ -2.3
PMS1-215ENST00000447232 TSTD3H0UI37 97 aa0.68□□□□□ -2.3
PMS1-215ENST00000447232 UBL5Q9BZL1 73 aa0.68□□□□□ -2.3
PMS1-215ENST00000447232 SPATA45Q537H7 98 aa0.68□□□□□ -2.3
PMS1-215ENST00000447232 PSPHP1O15172 72 aa0.67□□□□□ -2.3
PMS1-215ENST00000447232 PRO0628Q9UI54 55 aa0.67□□□□□ -2.3
PMS1-215ENST00000447232 FAM240AA0A1B0GVK7 77 aa0.67□□□□□ -2.3
PMS1-215ENST00000447232 SPTSSBQ8NFR3 76 aa0.67□□□□□ -2.3
PMS1-215ENST00000447232 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
PMS1-215ENST00000447232 SPATA8Q6RVD6 105 aa0.65□□□□□ -2.3
PMS1-215ENST00000447232 H3BT86 120 aa0.65□□□□□ -2.31
PMS1-215ENST00000447232 S100A2P29034 98 aa0.64□□□□□ -2.31
PMS1-215ENST00000447232 TAX1BP3O14907 124 aa0.64□□□□□ -2.31
PMS1-215ENST00000447232 MP68P56378 58 aa0.64□□□□□ -2.31
PMS1-215ENST00000447232 PMAIP1Q13794 54 aa0.64□□□□□ -2.31
PMS1-215ENST00000447232 HIST1H4AP62805 103 aaKnown RBP0.63□□□□□ -2.31
PMS1-215ENST00000447232 SMIM26A0A096LP01 95 aa0.63□□□□□ -2.31
PMS1-215ENST00000447232 ACYP2P14621 99 aa0.62□□□□□ -2.31
PMS1-215ENST00000447232 SMIM6P0DI80 62 aa0.62□□□□□ -2.31
PMS1-215ENST00000447232 SMIM20Q8N5G0 67 aa0.62□□□□□ -2.31
PMS1-215ENST00000447232 ANAPC13Q9BS18 74 aa0.61□□□□□ -2.31
PMS1-215ENST00000447232 SPANXA2-OT1Q8N9U9 137 aa0.6□□□□□ -2.31
PMS1-215ENST00000447232 K7ERS5 55 aa0.6□□□□□ -2.31
PMS1-215ENST00000447232 K7ERU9 68 aa0.6□□□□□ -2.31
PMS1-215ENST00000447232 KTN1-AS1Q86SY8 53 aa0.6□□□□□ -2.31
PMS1-215ENST00000447232 A0A1B0GV90 55 aa0.59□□□□□ -2.31
PMS1-215ENST00000447232 J3QR89 54 aa0.59□□□□□ -2.31
PMS1-215ENST00000447232 CHKB-CPT1BH3BT56 60 aa0.58□□□□□ -2.32
PMS1-215ENST00000447232 LUZP6Q538Z0 58 aa0.58□□□□□ -2.32
PMS1-215ENST00000447232 H3BPC8 53 aa0.58□□□□□ -2.32
PMS1-215ENST00000447232 A0A1B0GU33 70 aa0.57□□□□□ -2.32
PMS1-215ENST00000447232 M0R143 59 aa0.56□□□□□ -2.32
PMS1-215ENST00000447232 TMEM258P61165 79 aa0.56□□□□□ -2.32
PMS1-215ENST00000447232 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
PMS1-215ENST00000447232 ATP5EP56381 51 aaPredicted RBP0.56□□□□□ -2.32
PMS1-215ENST00000447232 UQCR10Q9UDW1 63 aa0.56□□□□□ -2.32
PMS1-215ENST00000447232 SERP1Q9Y6X1 66 aa0.55□□□□□ -2.32
PMS1-215ENST00000447232 COL5A1-AS1Q5SY13 56 aa0.55□□□□□ -2.32
PMS1-215ENST00000447232 GTF2H5Q6ZYL4 71 aa0.54□□□□□ -2.32
PMS1-215ENST00000447232 CCDC179H3BU77 68 aa0.53□□□□□ -2.32
PMS1-215ENST00000447232 A6NED7 52 aa0.53□□□□□ -2.32
PMS1-215ENST00000447232 BRK1Q8WUW1 75 aa0.53□□□□□ -2.32
PMS1-215ENST00000447232 COX7CP15954 63 aa0.51□□□□□ -2.33
PMS1-215ENST00000447232 Q1T7F1 81 aa0.51□□□□□ -2.33
PMS1-215ENST00000447232 PYY3Q5JQD4 70 aa0.51□□□□□ -2.33
PMS1-215ENST00000447232 ATP5EP2Q5VTU8 51 aa0.51□□□□□ -2.33
PMS1-215ENST00000447232 ROMO1P60602 79 aa0.51□□□□□ -2.33
PMS1-215ENST00000447232 F8W1H4 67 aa0.5□□□□□ -2.33
PMS1-215ENST00000447232 H7BZZ5 65 aa0.49□□□□□ -2.33
PMS1-215ENST00000447232 CDC42SE1Q9NRR8 79 aa0.49□□□□□ -2.33
PMS1-215ENST00000447232 INE1O15225 51 aa0.48□□□□□ -2.33
PMS1-215ENST00000447232 MIR22HGQ0VDD5 57 aa0.48□□□□□ -2.33
PMS1-215ENST00000447232 SERP2Q8N6R1 65 aa0.48□□□□□ -2.33
PMS1-215ENST00000447232 LINC00643Q86TS7 51 aa0.46□□□□□ -2.34
PMS1-215ENST00000447232 UQCR11O14957 56 aa0.44□□□□□ -2.34
PMS1-215ENST00000447232 ETDBQ3ZM63 59 aa0.44□□□□□ -2.34
PMS1-215ENST00000447232 SNURFQ9Y675 71 aa0.44□□□□□ -2.34
PMS1-215ENST00000447232 LINC01558Q9Y6Z2 57 aa0.43□□□□□ -2.34
PMS1-215ENST00000447232 COA5Q86WW8 74 aa0.43□□□□□ -2.34
PMS1-215ENST00000447232 PRR15LQ9BU68 103 aa0.41□□□□□ -2.34
PMS1-215ENST00000447232 A0A1B0GU69 56 aa0.4□□□□□ -2.35
PMS1-215ENST00000447232 PRM1P04553 51 aa0.16□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms