RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	LOC100996750	A0A140TA64	210 aa		4.37	□□□□□ -1.71
DDR1-238	ENST00000446312	KRTAP19-7	Q3SYF9	63 aa		4.34	□□□□□ -1.71
DDR1-238	ENST00000446312	MT1G	P13640	62 aa		4.24	□□□□□ -1.73
DDR1-238	ENST00000446312	MT1L	Q93083	61 aa		4.23	□□□□□ -1.73
DDR1-238	ENST00000446312	SYNE2	Q8WXH0	6885 aa	Known RBP	4.22	□□□□□ -1.73
DDR1-238	ENST00000446312	KRTAP2-3	P0C7H8	128 aa		4.2	□□□□□ -1.74
DDR1-238	ENST00000446312	KRTAP2-4	Q9BYR9	128 aa		4.2	□□□□□ -1.74
DDR1-238	ENST00000446312	KRTAP2-1	Q9BYU5	128 aa		4.2	□□□□□ -1.74
DDR1-238	ENST00000446312	MT1E	P04732	61 aa		4.19	□□□□□ -1.74
DDR1-238	ENST00000446312	KRTAP12-4	P60329	112 aa		4.13	□□□□□ -1.75
DDR1-238	ENST00000446312	KRTAP4-9	Q9BYQ8	210 aa		4.08	□□□□□ -1.76
DDR1-238	ENST00000446312	LCE3B	Q5TA77	95 aa		4.03	□□□□□ -1.76
DDR1-238	ENST00000446312	KRTAP19-6	Q3LI70	58 aa		4.02	□□□□□ -1.77
DDR1-238	ENST00000446312	MACF1	Q9UPN3	7388 aa	Known RBP	3.99	□□□□□ -1.77
DDR1-238	ENST00000446312	LCE5A	Q5TCM9	118 aa		3.97	□□□□□ -1.77
DDR1-238	ENST00000446312	KRTAP19-4	Q3LI73	84 aa		3.96	□□□□□ -1.78
DDR1-238	ENST00000446312	SPRR2F	Q96RM1	72 aa		3.96	□□□□□ -1.78
DDR1-238	ENST00000446312	MDN1	Q9NU22	5596 aa		3.95	□□□□□ -1.78
DDR1-238	ENST00000446312	MT1M	Q8N339	61 aa		3.93	□□□□□ -1.78
DDR1-238	ENST00000446312	KRTAP19-3	Q7Z4W3	81 aa		3.87	□□□□□ -1.79
DDR1-238	ENST00000446312	LCE1F	Q5T754	118 aa		3.82	□□□□□ -1.8
DDR1-238	ENST00000446312	KRTAP9-4	Q9BYQ2	154 aa		3.82	□□□□□ -1.8
DDR1-238	ENST00000446312	KRTAP2-2	Q9BYT5	123 aa		3.8	□□□□□ -1.8
DDR1-238	ENST00000446312	LCE1A	Q5T7P2	110 aa		3.76	□□□□□ -1.81
DDR1-238	ENST00000446312	PRM1	P04553	51 aa		3.74	□□□□□ -1.81
DDR1-238	ENST00000446312	KRTAP6-1	Q3LI64	71 aa		3.72	□□□□□ -1.81
DDR1-238	ENST00000446312	KRTAP9-7	A8MTY7	169 aa		3.71	□□□□□ -1.82
DDR1-238	ENST00000446312	KRTAP6-3	Q3LI67	103 aa		3.71	□□□□□ -1.82
DDR1-238	ENST00000446312	LCE1E	Q5T753	118 aa		3.66	□□□□□ -1.82
DDR1-238	ENST00000446312	LCE4A	Q5TA78	99 aa		3.65	□□□□□ -1.82
DDR1-238	ENST00000446312	KRTAP9-9	Q9BYP9	154 aa		3.65	□□□□□ -1.83
DDR1-238	ENST00000446312	KRTAP9-6	A0A140TA67	174 aa		3.64	□□□□□ -1.83
DDR1-238	ENST00000446312	KRTAP9-2	Q9BYQ4	174 aa		3.61	□□□□□ -1.83
DDR1-238	ENST00000446312	LCE3D	Q9BYE3	92 aa		3.61	□□□□□ -1.83
DDR1-238	ENST00000446312	LCE3E	Q5T5B0	92 aa		3.52	□□□□□ -1.85
DDR1-238	ENST00000446312	SPRR2E	P22531	72 aa		3.49	□□□□□ -1.85
DDR1-238	ENST00000446312	SPRR2B	P35325	72 aa		3.49	□□□□□ -1.85
DDR1-238	ENST00000446312	SPRR2A	P35326	72 aa		3.49	□□□□□ -1.85
DDR1-238	ENST00000446312	LCE1D	Q5T752	114 aa		3.46	□□□□□ -1.86
DDR1-238	ENST00000446312	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.46	□□□□□ -1.86
DDR1-238	ENST00000446312	MT1A	P04731	61 aa		3.44	□□□□□ -1.86
DDR1-238	ENST00000446312	KRTAP5-9	P26371	169 aa		3.43	□□□□□ -1.86
DDR1-238	ENST00000446312	KRTAP6-2	Q3LI66	62 aa		3.4	□□□□□ -1.87
DDR1-238	ENST00000446312	SPRR2D	P22532	72 aa		3.3	□□□□□ -1.88
DDR1-238	ENST00000446312	MUC19	Q7Z5P9	8384 aa		3.19	□□□□□ -1.9
DDR1-238	ENST00000446312	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	3.17	□□□□□ -1.9
DDR1-238	ENST00000446312	MT4	P47944	62 aa		3.16	□□□□□ -1.9
DDR1-238	ENST00000446312	MT3	P25713	68 aa		3.13	□□□□□ -1.91
DDR1-238	ENST00000446312	KRTAP4-6	Q9BYQ5	205 aa		3.07	□□□□□ -1.92
DDR1-238	ENST00000446312	NEB	P20929	6669 aa		2.99	□□□□□ -1.93
DDR1-238	ENST00000446312	KRTAP5-4	Q6L8H1	288 aa		2.97	□□□□□ -1.93
DDR1-238	ENST00000446312	LCE1B	Q5T7P3	118 aa		2.91	□□□□□ -1.94
DDR1-238	ENST00000446312	HMCN1	Q96RW7	5635 aa		2.9	□□□□□ -1.94
DDR1-238	ENST00000446312	MUC5AC	P98088	5654 aa		2.88	□□□□□ -1.95
DDR1-238	ENST00000446312	KRTAP4-11	Q9BYQ6	195 aa		2.83	□□□□□ -1.96
DDR1-238	ENST00000446312	KRTAP20-2	Q3LI61	65 aa		2.8	□□□□□ -1.96
DDR1-238	ENST00000446312	KRTAP5-2	Q701N4	177 aa		2.76	□□□□□ -1.97
DDR1-238	ENST00000446312	KRTAP5-3	Q6L8H2	238 aa		2.68	□□□□□ -1.98
DDR1-238	ENST00000446312	KRTAP20-1	Q3LI63	56 aa		2.61	□□□□□ -1.99
DDR1-238	ENST00000446312	KRTAP4-4	Q9BYR3	166 aa		2.56	□□□□□ -2
DDR1-238	ENST00000446312	KRTAP4-12	Q9BQ66	201 aa		2.52	□□□□□ -2.01
DDR1-238	ENST00000446312	KRTAP5-10	Q6L8G5	202 aa		2.5	□□□□□ -2.01
DDR1-238	ENST00000446312	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.43	□□□□□ -2.02
DDR1-238	ENST00000446312	LCE1C	Q5T751	118 aa		2.41	□□□□□ -2.02
DDR1-238	ENST00000446312	KRTAP4-2	Q9BYR5	136 aa		2.4	□□□□□ -2.02
DDR1-238	ENST00000446312	KRTAP5-1	Q6L8H4	278 aa		2.39	□□□□□ -2.03
DDR1-238	ENST00000446312	AHNAK2	Q8IVF2	5795 aa		2.35	□□□□□ -2.03
DDR1-238	ENST00000446312	KRTAP21-2	Q3LI59	83 aa		2.25	□□□□□ -2.05
DDR1-238	ENST00000446312	KRTAP5-8	O75690	187 aa		2.24	□□□□□ -2.05
DDR1-238	ENST00000446312	KRTAP21-1	Q3LI58	79 aa		2.23	□□□□□ -2.05
DDR1-238	ENST00000446312	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.19	□□□□□ -2.06
DDR1-238	ENST00000446312	KRTAP5-7	Q6L8G8	165 aa		2.15	□□□□□ -2.07
DDR1-238	ENST00000446312	GPR98	Q8WXG9	6306 aa		2.06	□□□□□ -2.08
DDR1-238	ENST00000446312	KRTAP5-11	Q6L8G4	156 aa		2	□□□□□ -2.09
DDR1-238	ENST00000446312	AHNAK	Q09666	5890 aa	Known RBP	1.77	□□□□□ -2.13
DDR1-238	ENST00000446312	PHGR1	C9JFL3	82 aa		1.76	□□□□□ -2.13
DDR1-238	ENST00000446312	MUC16	Q8WXI7	14507 aa		1.2	□□□□□ -2.22

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