RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
SSBP3-208ENST00000444533 SPRR2EP22531 72 aa5.39□□□□□ -1.55
SSBP3-208ENST00000444533 SPRR2BP35325 72 aa5.39□□□□□ -1.55
SSBP3-208ENST00000444533 SPRR2AP35326 72 aa5.39□□□□□ -1.55
SSBP3-208ENST00000444533 MUC12Q9UKN1 5478 aa5.37□□□□□ -1.55
SSBP3-208ENST00000444533 CDC42SE1Q9NRR8 79 aa5.35□□□□□ -1.55
SSBP3-208ENST00000444533 KRTAP25-1Q3LHN0 102 aa5.31□□□□□ -1.56
SSBP3-208ENST00000444533 NEBP20929 6669 aa5.29□□□□□ -1.56
SSBP3-208ENST00000444533 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
SSBP3-208ENST00000444533 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
SSBP3-208ENST00000444533 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
SSBP3-208ENST00000444533 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
SSBP3-208ENST00000444533 BRK1Q8WUW1 75 aa5.24□□□□□ -1.57
SSBP3-208ENST00000444533 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
SSBP3-208ENST00000444533 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
SSBP3-208ENST00000444533 SPRR2DP22532 72 aa5.21□□□□□ -1.58
SSBP3-208ENST00000444533 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
SSBP3-208ENST00000444533 MT1EP04732 61 aa5.2□□□□□ -1.58
SSBP3-208ENST00000444533 ROMO1P60602 79 aa5.19□□□□□ -1.58
SSBP3-208ENST00000444533 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
SSBP3-208ENST00000444533 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
SSBP3-208ENST00000444533 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
SSBP3-208ENST00000444533 KRTAP23-1A1A580 65 aa5.11□□□□□ -1.59
SSBP3-208ENST00000444533 KRTAP12-3P60328 96 aa5.1□□□□□ -1.59
SSBP3-208ENST00000444533 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
SSBP3-208ENST00000444533 MT1GP13640 62 aa5.06□□□□□ -1.6
SSBP3-208ENST00000444533 MT1LQ93083 61 aa5.02□□□□□ -1.61
SSBP3-208ENST00000444533 KRTAP5-3Q6L8H2 238 aa5.01□□□□□ -1.61
SSBP3-208ENST00000444533 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
SSBP3-208ENST00000444533 KRTAP2-1Q9BYU5 128 aa5.01□□□□□ -1.61
SSBP3-208ENST00000444533 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SSBP3-208ENST00000444533 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
SSBP3-208ENST00000444533 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
SSBP3-208ENST00000444533 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
SSBP3-208ENST00000444533 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
SSBP3-208ENST00000444533 LUZP6Q538Z0 58 aa4.72□□□□□ -1.65
SSBP3-208ENST00000444533 LCE3CQ5T5A8 94 aa4.71□□□□□ -1.66
SSBP3-208ENST00000444533 MT4P47944 62 aa4.51□□□□□ -1.69
SSBP3-208ENST00000444533 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SSBP3-208ENST00000444533 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SSBP3-208ENST00000444533 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SSBP3-208ENST00000444533 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
SSBP3-208ENST00000444533 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SSBP3-208ENST00000444533 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
SSBP3-208ENST00000444533 MT1AP04731 61 aa4.29□□□□□ -1.72
SSBP3-208ENST00000444533 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
SSBP3-208ENST00000444533 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
SSBP3-208ENST00000444533 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
SSBP3-208ENST00000444533 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
SSBP3-208ENST00000444533 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
SSBP3-208ENST00000444533 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
SSBP3-208ENST00000444533 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
SSBP3-208ENST00000444533 KRTAP5-10Q6L8G5 202 aa3.99□□□□□ -1.77
SSBP3-208ENST00000444533 KRTAP5-2Q701N4 177 aa3.99□□□□□ -1.77
SSBP3-208ENST00000444533 MT3P25713 68 aa3.96□□□□□ -1.78
SSBP3-208ENST00000444533 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
SSBP3-208ENST00000444533 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.83□□□□□ -1.8
SSBP3-208ENST00000444533 KRTAP5-7Q6L8G8 165 aa3.82□□□□□ -1.8
SSBP3-208ENST00000444533 INE1O15225 51 aa3.8□□□□□ -1.8
SSBP3-208ENST00000444533 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
SSBP3-208ENST00000444533 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SSBP3-208ENST00000444533 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SSBP3-208ENST00000444533 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
SSBP3-208ENST00000444533 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
SSBP3-208ENST00000444533 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SSBP3-208ENST00000444533 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SSBP3-208ENST00000444533 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
SSBP3-208ENST00000444533 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
SSBP3-208ENST00000444533 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
SSBP3-208ENST00000444533 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SSBP3-208ENST00000444533 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
SSBP3-208ENST00000444533 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SSBP3-208ENST00000444533 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SSBP3-208ENST00000444533 PRM1P04553 51 aa2.64□□□□□ -1.99
SSBP3-208ENST00000444533 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
SSBP3-208ENST00000444533 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
SSBP3-208ENST00000444533 KRTAP21-1Q3LI58 79 aa1.81□□□□□ -2.12
SSBP3-208ENST00000444533 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 17.1 ms